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Sample GSM2890425 Query DataSets for GSM2890425
Status Public on Dec 13, 2019
Title SubcutaneousAdiposeTissueFamily10Twin1
Sample type RNA
 
Source name Subcutaneous Adipose Tissue
Organism Homo sapiens
Characteristics individual: Family10Twin1
gender: female
age: 24
bmi category: heavy
tissue: SAT
Treatment protocol Total RNA extract treated with DNase I (Qiagen)
Growth protocol SAT biopsies via a surgical technique under local anaesthesia
Extracted molecule total RNA
Extraction protocol RNeasy Lipid Tissue Mini Kit (Qiagen) to extract SAT RNA
Label biotin
Label protocol biotin
 
Hybridization protocol hybridized 250ng to Affymetrix U133 Plus 2.0 microarray
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
Data processing GCRMA method used to normalize data
 
Submission date Dec 15, 2017
Last update date Dec 13, 2019
Contact name Maheswary Muniandy
E-mail(s) maheswary.muniandy@helsinki.fi
Organization name University Helsinki
Street address Tukholmankatu 8
City Helsinki
ZIP/Postal code 00270
Country Finland
 
Platform ID GPL19109
Series (1)
GSE92405 Gene expression profile of subcutaneous adipose tissue in BMI-discordant monozygotic twin pairs in obesity

Data table header descriptions
ID_REF
VALUE log2 GCRMA intensity value

Data table
ID_REF VALUE
100009676_at 2.186208019
10000_at 5.25580809
10001_at 7.110720161
10002_at 2.167653451
10003_at 6.171736467
100048912_at 2.167653451
100049716_at 7.269166337
10004_at 2.480849786
10005_at 5.808598551
10006_at 10.03956566
10007_at 8.825548508
10008_at 6.135007329
100093630_at 9.449353092
100093698_at 2.167653451
10009_at 7.534406716
1000_at 2.167653451
100101467_at 5.816483547
100101938_at 2.167653451
10010_at 9.036351171
100113407_at 11.35574845

Total number of rows: 19612

Table truncated, full table size 403 Kbytes.




Supplementary file Size Download File type/resource
GSM2890425_Family10Twin1.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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