NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM2890448 Query DataSets for GSM2890448
Status Public on Dec 13, 2019
Title SubcutaneousAdiposeTissueFamily21Twin2
Sample type RNA
 
Source name Subcutaneous Adipose Tissue
Organism Homo sapiens
Characteristics individual: Family21Twin2
gender: female
age: 36
bmi category: lean
tissue: SAT
Treatment protocol Total RNA extract treated with DNase I (Qiagen)
Growth protocol SAT biopsies via a surgical technique under local anaesthesia
Extracted molecule total RNA
Extraction protocol RNeasy Lipid Tissue Mini Kit (Qiagen) to extract SAT RNA
Label biotin
Label protocol biotin
 
Hybridization protocol hybridized 250ng to Affymetrix U133 Plus 2.0 microarray
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
Data processing GCRMA method used to normalize data
 
Submission date Dec 15, 2017
Last update date Dec 13, 2019
Contact name Maheswary Muniandy
E-mail(s) maheswary.muniandy@helsinki.fi
Organization name University Helsinki
Street address Tukholmankatu 8
City Helsinki
ZIP/Postal code 00270
Country Finland
 
Platform ID GPL19109
Series (1)
GSE92405 Gene expression profile of subcutaneous adipose tissue in BMI-discordant monozygotic twin pairs in obesity

Data table header descriptions
ID_REF
VALUE log2 GCRMA intensity value

Data table
ID_REF VALUE
100009676_at 2.186208019
10000_at 4.993422687
10001_at 7.998809629
10002_at 2.167653451
10003_at 7.662944604
100048912_at 2.167653451
100049716_at 6.86464245
10004_at 2.52046027
10005_at 5.316890212
10006_at 10.04698341
10007_at 8.178097013
10008_at 4.563050098
100093630_at 9.664310235
100093698_at 2.167653451
10009_at 7.445546411
1000_at 2.167653451
100101467_at 5.688969077
100101938_at 2.167653451
10010_at 8.990423741
100113407_at 11.20005344

Total number of rows: 19612

Table truncated, full table size 403 Kbytes.




Supplementary file Size Download File type/resource
GSM2890448_Family21Twin2.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap