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Sample GSM290994 Query DataSets for GSM290994
Status Public on Jul 01, 2008
Title Day14 DV10 #1
Sample type RNA
 
Source name Day14 DV10
Organism Saccharomyces cerevisiae
Characteristics strain: DV10
replicate: 1
time: Day 14 of fermentation
Extracted molecule total RNA
Extraction protocol Hot Phenol Method
Label Biotin
Label protocol Standard Affymetrix Procedure
 
Hybridization protocol Standard Affymetrix Procedure
Scan protocol Standard Affymetrix Procedure
Description N/A
Data processing Standard Affymetrix Procedure, MAS5.0
 
Submission date May 24, 2008
Last update date Aug 04, 2010
Contact name Debra Rossouw
E-mail(s) debra@sun.ac.za
Organization name University of Stellenbosch
Department Institute for Wine Biotechnology
Lab Yeast
Street address Cnr Neethling and Victoria rd
City Stellenbosch
State/province Western Cape
ZIP/Postal code 7600
Country South Africa
 
Platform ID GPL2529
Series (1)
GSE11651 Transcriptomic profiling of five industrial wine yeast strains at three time points during allcoholic fermentation

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 272.043 P 4.42873e-05
AFFX-BioB-M_at 418.312 P 4.42873e-05
AFFX-BioB-3_at 291.274 P 5.16732e-05
AFFX-BioC-5_at 565.099 P 5.16732e-05
AFFX-BioC-3_at 872.516 P 4.42873e-05
AFFX-BioDn-5_at 1629.47 P 4.42873e-05
AFFX-BioDn-3_at 3442.49 P 4.42873e-05
AFFX-CreX-5_at 10170.6 P 5.16732e-05
AFFX-CreX-3_at 9307.66 P 4.42873e-05
AFFX-DapX-5_at 865.927 P 4.42873e-05
AFFX-DapX-M_at 2235.91 P 4.42873e-05
AFFX-DapX-3_at 3554.5 P 4.42873e-05
AFFX-LysX-5_at 124.47 P 4.42873e-05
AFFX-LysX-M_at 253.755 P 4.42873e-05
AFFX-LysX-3_at 629.451 P 4.42873e-05
AFFX-PheX-5_at 154.319 P 4.42873e-05
AFFX-PheX-M_at 229.686 P 4.42873e-05
AFFX-PheX-3_at 400.79 P 4.42873e-05
AFFX-ThrX-5_at 126.891 P 8.14279e-05
AFFX-ThrX-M_at 296.261 P 4.42873e-05

Total number of rows: 10928

Table truncated, full table size 337 Kbytes.




Supplementary file Size Download File type/resource
GSM290994.CEL.gz 932.9 Kb (ftp)(http) CEL
GSM290994.CHP.gz 58.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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