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Sample GSM30960 Query DataSets for GSM30960
Status Public on Sep 30, 2004
Title F1#67 U34A
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 23, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) jways@mco.edu
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL85
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 4.2 A 0.852061
AFFX-MurIL10_at 3.2 A 0.712257
AFFX-MurIL4_at 0.7 A 0.916408
AFFX-MurFAS_at 1.7 A 0.843268
AFFX-BioB-5_at 75.9 A 0.089478
AFFX-BioB-M_at 181.4 P 0.000225
AFFX-BioB-3_at 77.2 P 0.00762
AFFX-BioC-5_at 374.7 P 0.000127
AFFX-BioC-3_at 244.2 P 0.000195
AFFX-BioDn-5_at 295.3 P 0.001248
AFFX-BioDn-3_at 1856 P 0.000127
AFFX-CreX-5_at 4186.4 P 0.000044
AFFX-CreX-3_at 5140.8 P 0.000044
AFFX-BioB-5_st 39 A 0.147939
AFFX-BioB-M_st 32.3 A 0.52976
AFFX-BioB-3_st 6.7 A 0.932322
AFFX-BioC-5_st 6.4 A 0.916408
AFFX-BioC-3_st 2 A 0.910522
AFFX-BioDn-5_st 21.9 A 0.262827
AFFX-BioDn-3_st 14.6 A 0.313723

Total number of rows: 8799

Table truncated, full table size 249 Kbytes.




Supplementary data files not provided

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