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Sample GSM30964 Query DataSets for GSM30964
Status Public on Sep 30, 2004
Title DA#56 U34A
Sample type RNA
 
Source name Heart, Left Ventricle
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description RNA was extracted from the left ventricle of the heart, taken from a single 15 week old inbred rat that was maintained under specific pathogen free conditions. Target cRNA was prepared using the Enzo Bioarray High Yield RNA Transcript Labeling Kit (Enzo Diagnostics, Farmingdale, NY), purified on a column (Rneasy mini kit, Qiagen), and hybridized to commercially available Affymetrix rat GeneChips arrays according to protocols recommended by the manufacturers. Data was analyzed using the GeneChip Expression Analysis Software (Affymetrix).
Keywords = quantitative real-time RT-PCR
Keywords = insulin receptor substrate 2 (Irs2)
Keywords = phosphatidylinositol 3-kinase
Keywords = regulatory subunit 1
Keywords = (Pik3r1)
Keywords = endurance running
Keywords = treadmill running
 
Submission date Sep 23, 2004
Last update date May 27, 2005
Contact name Justin A. Ways
E-mail(s) jways@mco.edu
Phone 419-383-4150
Organization name Medical College of Ohio
Department Physiology and Cardiovascular Genomics
Street address 3035 Arlington Ave.
City Toledo
State/province OH
ZIP/Postal code 43614
Country USA
 
Platform ID GPL85
Series (1)
GSE1795 Expression Profiling of DA, COP, and F1(COPxDA) rat left ventricles

Data table header descriptions
ID_REF
VALUE normalized signal representing quantity of transcript
ABS_CALL absolute detection call where P=present, A=absent, and M=marginal
DETECTION P-VALUE measure of the significance of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 3.4 A 0.852061
AFFX-MurIL10_at 2.2 A 0.749204
AFFX-MurIL4_at 0.4 A 0.945787
AFFX-MurFAS_at 2.9 A 0.724854
AFFX-BioB-5_at 9.2 A 0.354453
AFFX-BioB-M_at 67.2 P 0.003212
AFFX-BioB-3_at 51.9 P 0.030976
AFFX-BioC-5_at 243.3 P 0.000258
AFFX-BioC-3_at 154.2 P 0.002023
AFFX-BioDn-5_at 207.1 P 0.004484
AFFX-BioDn-3_at 1385.7 P 0.000127
AFFX-CreX-5_at 3321 P 0.000044
AFFX-CreX-3_at 4517.3 P 0.000044
AFFX-BioB-5_st 56.4 A 0.102165
AFFX-BioB-M_st 28.6 A 0.559354
AFFX-BioB-3_st 7.3 A 0.945787
AFFX-BioC-5_st 4.4 A 0.949771
AFFX-BioC-3_st 2.2 A 0.949771
AFFX-BioDn-5_st 39.9 A 0.239063
AFFX-BioDn-3_st 48.5 A 0.108979

Total number of rows: 8799

Table truncated, full table size 249 Kbytes.




Supplementary data files not provided

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