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GEO accession:
Sample GSM312457
Query DataSets for GSM312457
Status
Public on Mar 23, 2015
Title
1845_p_2
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
16448
184.181
1002
756.6848
8.4732
1003
3.6129
0.0405
1004
15.4872
0.1734
1005
11.2222
0.1257
1006
33.0408
0.37
1007
22.7667
0.2549
1008
15770.2646
176.5919
1009
592.4445
6.6341
1010
529.7325
5.9318
1011
111.0976
1.244
1012
68.4286
0.7662
1013
32.7714
0.367
1014
18.625
0.2086
1015
16192.7363
181.3226
1016
169.3733
1.8966
1017
29.2857
0.3279
1018
10.7436
0.1203
1019
7.5873
0.085
1020
2.7941
0.0313
Total number of rows:
54359
Table truncated, full table size
1170 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312457.txt.gz
2.3 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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