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GEO accession:
Sample GSM312474
Query DataSets for GSM312474
Status
Public on Mar 23, 2015
Title
2318_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6214.6348
122.7937
1002
266.725
5.2702
1003
26.4328
0.5223
1004
24.1455
0.4771
1005
21.1273
0.4174
1006
28.7826
0.5687
1007
36.7857
0.7268
1008
6258.1025
123.6525
1009
192.679
3.8071
1010
188.8133
3.7307
1011
103.9268
2.0535
1012
35.8197
0.7078
1013
22.0333
0.4354
1014
26.9194
0.5319
1015
6781.7808
133.9998
1016
49.4
0.9761
1017
51.6849
1.0212
1018
21.0435
0.4158
1019
14.5484
0.2875
1020
21.4054
0.4229
Total number of rows:
54359
Table truncated, full table size
1166 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312474.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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