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GEO accession:
Sample GSM312486
Query DataSets for GSM312486
Status
Public on Mar 23, 2015
Title
2654_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, chemoradiotherapy
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, chemoradiotherapy
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
6339.6279
136.9881
1002
183.557
3.9663
1003
32.65
0.7055
1004
33.5862
0.7257
1005
26.2308
0.5668
1006
34.0938
0.7367
1007
35.6197
0.7697
1008
6545.5186
141.437
1009
185.2346
4.0026
1010
139.6351
3.0173
1011
37.1176
0.802
1012
40.9844
0.8856
1013
29.2462
0.632
1014
38.4167
0.8301
1015
6561.3218
141.7785
1016
50.3333
1.0876
1017
31.45
0.6796
1018
25.2667
0.546
1019
24.9032
0.5381
1020
28.082
0.6068
Total number of rows:
54359
Table truncated, full table size
1163 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312486.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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