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GEO accession:
Sample GSM312490
Query DataSets for GSM312490
Status
Public on Mar 23, 2015
Title
2897_p_1
Sample type
RNA
Source name
biopsy, prior to treatment, radiotherapy alone
Organism
Homo sapiens
Characteristics
female, cervical cancer
Extracted molecule
total RNA
Extraction protocol
ISOGEN(NIPPON GENE)+RNeasy(QIAGEN)
Label
Cy5
Label protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270813678-B500%29?OpenDocument&hometitle=WebDocs
Hybridization protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3ACodeLink+Gene+E%28270810969-B500%29?OpenDocument&hometitle=WebDocs
Scan protocol
http://www4.amershambiosciences.com/APTRIX/upp00919.nsf/Content/WD%3AScanning+CodeLi%28248345081-B500%29?OpenDocument&hometitle=WebDocs
Description
prior to treatment, radiotherapy alone
Data processing
global median normalization
Submission date
Aug 13, 2008
Last update date
Mar 23, 2015
Contact name
Shuhei Noda
E-mail(s)
s_noda@nirs.go.jp
Organization name
National institute of radiological sciences
Department
Frontier research center
Street address
Anagawa 4-9-1
City
Chiba
State/province
Chiba
ZIP/Postal code
2658333
Country
Japan
Platform ID
GPL2895
Series (1)
GSE6213
Cervical cancer samples in NIRS
Data table header descriptions
ID_REF
Raw_intensity
Raw signal intensity value
VALUE
Median normalized signal intensity value
Data table
ID_REF
Raw_intensity
VALUE
1001
5199.1895
111.8195
1002
198.5765
4.2708
1003
24.6415
0.53
1004
27.5818
0.5932
1005
25.8276
0.5555
1006
27.193
0.5848
1007
34.7429
0.7472
1008
6224.3418
133.8676
1009
402.4066
8.6546
1010
121.5513
2.6142
1011
66.4578
1.4293
1012
35
0.7527
1013
23.2759
0.5006
1014
25.5
0.5484
1015
6540.1445
140.6596
1016
36.1077
0.7766
1017
27.1311
0.5835
1018
21.8667
0.4703
1019
18.3469
0.3946
1020
24.1897
0.5202
Total number of rows:
54359
Table truncated, full table size
1164 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM312490.txt.gz
2.2 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
Processed data provided as supplementary file
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