|
| Status |
Public on Aug 16, 2019 |
| Title |
cfDNA_6334538_Cirrhosis_alone |
| Sample type |
genomic |
| |
|
| Source name |
plasma
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Cirrhosis_alone
tissue: plasma
|
| Treatment protocol |
N/A
|
| Growth protocol |
N/A
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
QIAamp Circulating Nucleic Acid Kit
|
| Label |
Cy3, Cy5
|
| Label protocol |
Manufacturer's recommendation
|
| |
|
| Hybridization protocol |
Manufacturer's recommendation
|
| Scan protocol |
Manufacturer's recommendation
|
| Data processing |
minfi (SWAN)
|
| |
|
| Submission date |
Apr 05, 2019 |
| Last update date |
Aug 16, 2019 |
| Contact name |
Keith D Robertson |
| E-mail(s) |
robertson.keith@mayo.edu
|
| Phone |
507-266-4886
|
| Organization name |
Mayo Clinic
|
| Department |
Molecular Pharmacology & Experimental Therapeutics
|
| Lab |
Epigenetic Etiology of Human Disease Laboratory
|
| Street address |
200 First Street SW, Stabile 12-70
|
| City |
Rochester |
| State/province |
MN |
| ZIP/Postal code |
55905 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE129374 |
Genome-wide discovery and validation of diagnostic DNA methylation-based biomarkers for hepatocellular cancer detection in circulating cell free DNA |
|
