|
| Status |
Public on Apr 24, 2019 |
| Title |
309-mut |
| Sample type |
RNA |
| |
|
| Source name |
KIC pancreatic tumor
|
| Organism |
Mus musculus |
| Characteristics |
strain: KIC
genotype/variation: TBK1 mutant
age: 8 weeks
tissue: Pancreatic tumor
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
Not provided
|
| Label protocol |
Not provided.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
Standard Illumina hybridization protocol.
|
| Description |
Replicate 3
|
| Data processing |
The data were normalised using quantile normalisation by UT Southwestern Microarray Core.
|
| |
|
| Submission date |
Apr 23, 2019 |
| Last update date |
Apr 24, 2019 |
| Contact name |
Emily Nicole Arner |
| E-mail(s) |
emily.arner@UTsouthwestern.edu
|
| Organization name |
UT Southwestern Medical Center
|
| Department |
Surgery
|
| Lab |
Rolf Brekken
|
| Street address |
6000 Harry Hines Blvd
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390 |
| Country |
USA |
| |
|
| Platform ID |
GPL18752 |
| Series (1) |
| GSE130232 |
Microarray of TBK1 WT and Mutant pancreatic tumors in the KIC model |
|
