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| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with miR-124 versus control transfected HeLa, 24 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with miR-124 duplex, 24 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 24 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
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| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
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| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
|
| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
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| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
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| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
-0.04608 |
0.04442 |
-0.17491 |
0.29953 |
FALSE |
-0.04608 |
| 1010498 |
-0.0554 |
0.04859 |
0.91809 |
0.25422 |
FALSE |
-0.0554 |
| 1010600 |
0.05708 |
0.5696 |
-2.28924 |
0.92017 |
FALSE |
0.05708 |
| 1010604 |
-0.03613 |
0.05022 |
-0.34361 |
0.47179 |
FALSE |
-0.03613 |
| 1010607 |
0.01399 |
0.05109 |
-0.04152 |
0.78428 |
FALSE |
0.01399 |
| 1010614 |
0.05074 |
0.07101 |
-1.19216 |
0.4749 |
FALSE |
0.05074 |
| 1010673 |
0.25499 |
0.06006 |
0.93345 |
0.00002 |
FALSE |
0.25499 |
| 1010712 |
0.00419 |
0.04812 |
-0.3218 |
0.93055 |
FALSE |
0.00419 |
| 1010719 |
0.1539 |
0.18977 |
-1.79157 |
0.41739 |
FALSE |
0.1539 |
| 1010720 |
-0.01327 |
0.04509 |
-0.34963 |
0.76858 |
FALSE |
-0.01327 |
| 1010724 |
-0.02166 |
0.0458 |
-0.58836 |
0.63629 |
FALSE |
-0.02166 |
| 1010731 |
0.04679 |
0.06079 |
0.92332 |
0.44147 |
FALSE |
0.04679 |
| 1010732 |
0.02005 |
0.0453 |
0.67267 |
0.658 |
FALSE |
0.02005 |
| 1011137 |
-0.08282 |
0.20949 |
-1.93106 |
0.6926 |
FALSE |
-0.08282 |
| 1011161 |
0.24464 |
0.04776 |
0.51607 |
3.01E-07 |
FALSE |
0.24464 |
| 1011321 |
-0.00598 |
0.1055 |
-1.51549 |
0.9548 |
FALSE |
-0.00598 |
| 1011371 |
0.11475 |
0.05154 |
-0.06362 |
0.02598 |
FALSE |
0.11475 |
| 1011383 |
-0.06172 |
0.22603 |
-1.97647 |
0.7848 |
FALSE |
-0.06172 |
| 1011465 |
0.0226 |
0.16855 |
-1.66721 |
0.89333 |
FALSE |
0.0226 |
| 1011468 |
-0.28464 |
0.05418 |
-0.17407 |
1.49E-07 |
FALSE |
-0.28464 |
Total number of rows: 23564
Table truncated, full table size 1354 Kbytes.
| Supplementary data files not provided |
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