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| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with chimiR-124-1 versus control transfected HeLa, 12 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with chimiR-124-1 duplex, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Sample author: Jason,M,Johnson
Keywords = microRNA
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| |
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| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
|
| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
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| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
|
| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
0.03562 |
0.06328 |
-0.78215 |
0.57352 |
FALSE |
0.03562 |
| 1010498 |
-0.00608 |
0.0609 |
0.69894 |
0.92051 |
FALSE |
-0.00608 |
| 1010600 |
0.01004 |
0.20435 |
-1.94073 |
0.96079 |
FALSE |
0.01004 |
| 1010604 |
0.0394 |
0.05261 |
-0.24625 |
0.45389 |
FALSE |
0.0394 |
| 1010607 |
0.03387 |
0.04618 |
-0.32179 |
0.46335 |
FALSE |
0.03387 |
| 1010614 |
0.10546 |
0.05596 |
-1.10706 |
0.05947 |
FALSE |
0.10546 |
| 1010673 |
0.07505 |
0.05331 |
0.91045 |
0.1592 |
FALSE |
0.07505 |
| 1010712 |
-0.01419 |
0.06117 |
-0.41562 |
0.81652 |
FALSE |
-0.01419 |
| 1010719 |
0.07959 |
0.2491 |
-1.71268 |
0.74934 |
FALSE |
0.07959 |
| 1010720 |
-0.05303 |
0.04426 |
-0.32414 |
0.23082 |
FALSE |
-0.05303 |
| 1010724 |
-0.01459 |
0.07934 |
-0.58554 |
0.85409 |
FALSE |
-0.01459 |
| 1010731 |
0.03156 |
0.04816 |
1.02498 |
0.51231 |
FALSE |
0.03156 |
| 1010732 |
0.02787 |
0.05432 |
0.80174 |
0.60793 |
FALSE |
0.02787 |
| 1011137 |
0.00622 |
0.11261 |
-1.66973 |
0.95594 |
FALSE |
0.00622 |
| 1011161 |
0.06986 |
0.0915 |
0.46075 |
0.44515 |
FALSE |
0.06986 |
| 1011321 |
-0.07267 |
0.19715 |
-1.2085 |
0.71241 |
FALSE |
-0.07267 |
| 1011371 |
0.11108 |
0.08334 |
-0.21533 |
0.18258 |
FALSE |
0.11108 |
| 1011383 |
0.00884 |
0.13533 |
-1.71353 |
0.94795 |
FALSE |
0.00884 |
| 1011453 |
0.18017 |
0.05386 |
-1.16803 |
0.00082 |
FALSE |
0.18017 |
| 1011465 |
-0.03319 |
0.13573 |
-1.84039 |
0.8068 |
FALSE |
-0.03319 |
Total number of rows: 23564
Table truncated, full table size 1358 Kbytes.
| Supplementary data files not provided |
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