 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 31, 2005 |
| Title |
HeLa transfected with miR-373/hes3 versus control transfected HeLa, 12 hours |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
HeLa transfected with miR-373/hes3 duplex, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Channel 2 |
| Source name |
Mock transfected HeLa, 12 hours
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| |
| Description |
100nM Oligofectamine transfection of duplexes as described in Lim et al., submitted to Nature, 2004
Keywords = microRNA
|
| |
|
| Submission date |
Dec 15, 2004 |
| Last update date |
Feb 01, 2007 |
| Contact name |
Lee Lim |
| E-mail(s) |
lee_lim@merck.com
|
| Phone |
206-802-7323
|
| Organization name |
Rosetta Inpharmatics
|
| Street address |
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98109 |
| Country |
USA |
| |
|
| Platform ID |
GPL1749 |
| Series (1) |
| GSE2075 |
Rosetta_miRNA_transfection_experiment |
|
| Data table header descriptions |
| ID_REF |
Rosetta generated unique probe identifier |
| VALUE |
same as UNF_VALUE but with flagged values removed |
| ERROR |
Error estimate for LOG10 RATIO (VALUE) |
| LOG_INTENSITY |
Averaged log10 intensity of a fluor-reversed chip pair [.5 * log10(CHANNEL1*CHANNEL2), error weighted] |
| P_VALUE |
P value that the probe target is differentially expressed in the two tissues |
| FAILED_QC |
TRUE for probes which failed a quality-control measure |
| UNF_VALUE |
LOG10 RATIO: Averaged log10 ratio of a fluor-reversed chip pair [log10(CHANNEL1/CHANNEL2), error weighted] |
| Data table |
| ID_REF |
VALUE |
ERROR |
LOG_INTENSITY |
P_VALUE |
FAILED_QC |
UNF_VALUE |
| 1010423 |
-6.21E-02 |
4.78E-02 |
-9.30E-02 |
1.94E-01 |
FALSE |
-6.21E-02 |
| 1010498 |
-3.35E-04 |
4.56E-02 |
7.98E-01 |
9.94E-01 |
FALSE |
-3.35E-04 |
| 1010600 |
-4.12E-02 |
5.67E-01 |
-2.408 |
9.42E-01 |
FALSE |
-4.12E-02 |
| 1010604 |
1.13E-02 |
4.89E-02 |
-9.27E-02 |
8.17E-01 |
FALSE |
1.13E-02 |
| 1010607 |
4.31E-02 |
4.75E-02 |
-2.22E-01 |
3.64E-01 |
FALSE |
4.31E-02 |
| 1010614 |
3.37E-02 |
7.77E-02 |
-1.046 |
6.64E-01 |
FALSE |
3.37E-02 |
| 1010673 |
6.34E-02 |
4.59E-02 |
7.88E-01 |
1.67E-01 |
FALSE |
6.34E-02 |
| 1010712 |
-9.42E-03 |
5.61E-02 |
-7.14E-02 |
8.67E-01 |
FALSE |
-9.42E-03 |
| 1010719 |
9.68E-02 |
2.78E-01 |
-2.156 |
7.28E-01 |
FALSE |
9.68E-02 |
| 1010720 |
-1.58E-02 |
4.99E-02 |
-2.99E-01 |
7.52E-01 |
FALSE |
-1.58E-02 |
| 1010724 |
3.68E-03 |
4.60E-02 |
-2.04E-01 |
9.36E-01 |
FALSE |
3.68E-03 |
| 1010731 |
3.52E-03 |
5.94E-02 |
1.078 |
9.53E-01 |
FALSE |
3.52E-03 |
| 1010732 |
1.52E-02 |
4.85E-02 |
6.66E-01 |
7.54E-01 |
FALSE |
1.52E-02 |
| 1011137 |
-7.36E-02 |
7.55E-02 |
-1.395 |
3.30E-01 |
FALSE |
-7.36E-02 |
| 1011161 |
1.73E-01 |
5.00E-02 |
6.09E-01 |
5.34E-04 |
FALSE |
1.73E-01 |
| 1011321 |
2.07E-02 |
6.47E-02 |
-1.239 |
7.49E-01 |
FALSE |
2.07E-02 |
| 1011371 |
-6.80E-02 |
5.79E-02 |
-7.06E-03 |
2.41E-01 |
FALSE |
-6.80E-02 |
| 1011383 |
-7.49E-03 |
1.15E-01 |
-1.656 |
9.48E-01 |
FALSE |
-7.49E-03 |
| 1011453 |
1.39E-01 |
6.05E-02 |
-1.023 |
2.13E-02 |
FALSE |
1.39E-01 |
| 1011465 |
-5.06E-02 |
1.80E-01 |
-1.999 |
7.79E-01 |
FALSE |
-5.06E-02 |
Total number of rows: 23880
Table truncated, full table size 1461 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
