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Sample GSM378007 Query DataSets for GSM378007
Status Public on Mar 06, 2009
Title NOMO-1/ADM
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics cell line: NOMO-1/ADM
tissue: Blood
k-ras dependence: not tested
Extracted molecule total RNA
Extraction protocol Qiagen RNA easy kit
Label biotin
Label protocol Biotinylation of RNA with Perkin Elmer PN Biotin-11-UTP, and Biotin-11-CTP)
 
Hybridization protocol Labelled RNA was processed using a protocol from Affymetrix's GeneChip Expression Analysis Technical Manual under Eukaryotic Sample and Array Processing
Scan protocol Scanning was performed with an Affymetrix GeneChip 3000 Scanner
Description Gene expression data
Data processing Data was processed with GCOS ver 1.4
 
Submission date Mar 05, 2009
Last update date Mar 05, 2009
Contact name Patricia Greninger
E-mail(s) pgreninger@partners.org
Organization name Massachusetts General Hospital Cancer Center
Department Center for Molecular Therapeutics
Lab Settleman Lab
Street address 149 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platform ID GPL1352
Series (1)
GSE15126 A gene expression signature associated with K-Ras addiction reveals regulators of EMT and tumor cell survival

Data table header descriptions
ID_REF
VALUE log2 GCRMA normalized values

Data table
ID_REF VALUE
1053_3p_at 9.54867
117_3p_at 3.14895
1494_3p_f_at 1.99497
1552275_3p_s_at 6.73271
1552281_3p_at 2.44861
1552296_3p_at 2.62254
1552302_3p_at 5.7583
1552311_3p_a_at 3.61071
1552321_3p_a_at 2.47102
1552340_3p_at 2.49658
1552343_3p_s_at 6.90893
1552354_3p_at 2.51827
1552476_3p_s_at 2.18191
1552480_3p_s_at 3.60681
1552504_3p_a_at 2.36813
1552518_3p_s_at 4.42661
1552528_3p_at 2.00865
1552535_3p_at 2.25135
1552566_3p_at 1.92254
1552575_3p_a_at 3.02535

Total number of rows: 52920

Table truncated, full table size 1417 Kbytes.




Supplementary file Size Download File type/resource
GSM378007.CEL.gz 4.2 Mb (ftp)(http) CEL
GSM378007.txt.gz 353.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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