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Sample GSM38250

Query DataSets for GSM38250

Status

Public on Jul 01, 2005

Title

SHR20-4

Sample type

RNA

Source name

Rat eft ventricle

Organism

Rattus norvegicus

Extracted molecule

total RNA

Description

Left ventricular gene expression profiles from 12-, 16- and 20-months old spontaneously hypertensive rats (SHRs) were compared with left ventricular profiles seen in age-matched Wistar-Kyoto (WKY) rats by screening Affymetrix U34A arrays (there are 4 samples in each timepoint except 3 samples of 20-months old WKYs).
Keywords = heart
Keywords = microarray
Keywords = SHR
Keywords = heart failure

Submission date

Dec 29, 2004

Last update date

May 29, 2005

Contact name

Jaana Rysä

E-mail(s)

jaana.rysa@oulu.fi

Phone

+358-8-5375262

Organization name

University of Oulu

Department

Pharmacology and toxicology

Street address

PO BOX 5000

City

University of OULU

ZIP/Postal code

90014

Country

Finland

Platform ID

GPL85

Series (1)

GSE2116

SHR-WKY

Data table header descriptions
ID_REF
VALUE	"Signal" as a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A) or marginal (M).
DETECTION P-VALUE	p-value that indicates the significance level of detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-MurIL2_at	2	A	0.843268
AFFX-MurIL10_at	1.8	A	0.783476
AFFX-MurIL4_at	2.9	A	0.737173
AFFX-MurFAS_at	1.3	A	0.824672
AFFX-BioB-5_at	93.8	P	0.001796
AFFX-BioB-M_at	156.7	P	0.000169
AFFX-BioB-3_at	54.3	P	0.001593
AFFX-BioC-5_at	309.7	P	0.00006
AFFX-BioC-3_at	255.9	P	0.000044
AFFX-BioDn-5_at	262	P	0.001593
AFFX-BioDn-3_at	1827.8	P	0.00006
AFFX-CreX-5_at	2771.1	P	0.000044
AFFX-CreX-3_at	3890.4	P	0.000044
AFFX-BioB-5_st	26	A	0.139482
AFFX-BioB-M_st	21.4	A	0.205732
AFFX-BioB-3_st	4.6	A	0.868639
AFFX-BioC-5_st	1.1	A	0.953518
AFFX-BioC-3_st	1.4	A	0.824672
AFFX-BioDn-5_st	13	A	0.300606
AFFX-BioDn-3_st	41.4	A	0.147939

Total number of rows: 8799

Table truncated, full table size 246 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM38250.CEL.gz	1.8 Mb	(ftp)(http)	CEL
GSM38250.EXP.gz	529 b	(ftp)(http)	EXP