 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 22, 2005 |
| Title |
DNGL-1 |
| Sample type |
RNA |
| |
|
| Source name |
Human PBMC
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Description |
HIV seropositive drug naïve group, viral load low
Keywords = HIV, Human, PBMC, in vivo
|
| |
|
| Submission date |
Jan 19, 2005 |
| Last update date |
Oct 28, 2005 |
| Contact name |
Maryanne Vahey |
| E-mail(s) |
mvahey@hivresearch.org
|
| Phone |
301-251-5058
|
| Fax |
301-762-7460
|
| Organization name |
Walter Reed Army Institute of Research
|
| Department |
|
| Lab |
Laboratory of Functional Genomics
|
| Street address |
1600 East Gude Drive
|
| City |
Rockville |
| State/province |
MD |
| ZIP/Postal code |
20850 |
| Country |
USA |
| |
|
| Platform ID |
GPL201 |
| Series (1) |
| GSE2171 |
HIV-1 infection in human PBMCs in vivo |
|
| Data table header descriptions |
| ID_REF |
Affymetrix ID |
| VALUE |
signal intensity output from MAS5.0 with target signal intensity being set to 500 |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M) |
| DETECTION P-VALUE |
p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-BioB-5_at |
2195.1 |
P |
0.000446 |
| AFFX-BioB-M_at |
4190.9 |
P |
0.000052 |
| AFFX-BioB-3_at |
2107.1 |
P |
0.000297 |
| AFFX-BioC-5_at |
5841.4 |
P |
0.000127 |
| AFFX-BioC-3_at |
3171.0 |
P |
0.000052 |
| AFFX-BioDn-5_at |
1742.9 |
P |
0.000127 |
| AFFX-BioDn-3_at |
9869.6 |
P |
0.000081 |
| AFFX-CreX-5_at |
13.2 |
A |
0.998752 |
| AFFX-CreX-3_at |
130.4 |
A |
0.544587 |
| AFFX-HUMISGF3A/M97935_5_at |
47.2 |
A |
0.772364 |
| AFFX-HUMISGF3A/M97935_MA_at |
231.1 |
A |
0.470241 |
| AFFX-HUMISGF3A/M97935_MB_at |
275.1 |
P |
0.023929 |
| AFFX-HUMISGF3A/M97935_3_at |
1175.8 |
P |
0.000127 |
| AFFX-HUMRGE/M10098_5_at |
676.8 |
P |
0.000169 |
| AFFX-HUMRGE/M10098_M_at |
776.7 |
P |
0.000390 |
| AFFX-HUMRGE/M10098_3_at |
1821.6 |
P |
0.000258 |
| AFFX-HUMGAPDH/M33197_5_at |
5513.8 |
P |
0.000044 |
| AFFX-HUMGAPDH/M33197_M_at |
6580.3 |
P |
0.000857 |
| AFFX-HUMGAPDH/M33197_3_at |
9964.9 |
P |
0.000044 |
| AFFX-HSAC07/X00351_5_at |
6502.8 |
P |
0.000169 |
Total number of rows: 8793
Table truncated, full table size 238 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM39116.cel.gz |
1.3 Mb |
(ftp)(http) |
CEL |
|
|
|
|
 |
