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Sample GSM394435 Query DataSets for GSM394435
Status Public on Apr 20, 2010
Title UMARY-1545-PONS-miRNA
Sample type RNA
 
Source name Human Brain Tissue: PONS
Organism Homo sapiens
Characteristics gender: male
age: 45
pmi: 20.0
tissuebank: UMARY
prep_hyb_batch: K
tissue: pons
Extracted molecule total RNA
Extraction protocol TRIZOL
Label biotin
Label protocol Illumina Human MicroRNA Expression Universal Arrays
 
Hybridization protocol Illumina Human MicroRNA Expression Universal Arrays
Scan protocol Illumina Beadstation
Description Human Brain Tissue: PONS
Data processing Beadstudio Gene Expression Module v3.2.7, quantile normalization
 
Submission date Apr 20, 2009
Last update date May 15, 2009
Contact name J Raphael Gibbs
E-mail(s) gibbsr@mail.nih.gov
Organization name National Institutue on Aging, NIH
Department Computational Biology Core
Lab Laboratory of Neurogenetics
Street address 35 Convent Drive, Bldg 35/1A1015, MSC3707
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL8178
Series (1)
GSE15745 Abundant Quantitative Trait Loci for CpG Methylation and Expression Across Human Brain Tissues

Data table header descriptions
ID_REF
VALUE Signal
Detection_Pval Illumina Detection p-value

Data table
ID_REF VALUE Detection_Pval
ILMN_3167304 388.4858 0.7177551
ILMN_3168038 646.9905 0.003340993
ILMN_3167890 37276.52 3.68E-38
ILMN_3167526 355.1572 0.8413845
ILMN_3167209 371.4803 0.7859697
ILMN_3167213 498.6297 0.2046932
ILMN_3167057 2126.29 3.68E-38
ILMN_3168313 449.4055 0.4212158
ILMN_3166972 424.7443 0.5457518
ILMN_3168149 798.2204 1.78E-06
ILMN_3168527 397.5898 0.6773754
ILMN_3167562 461.1374 0.3639098
ILMN_3168099 2538.497 3.68E-38
ILMN_3168017 1210.421 2.60E-23
ILMN_3167951 861.7385 2.61E-08
ILMN_3167172 368.0519 0.7984587
ILMN_3167994 637.5794 0.004763038
ILMN_3166997 472.4352 0.3114482
ILMN_3166980 555.903 0.06014504
ILMN_3168362 657.2716 0.002234031

Total number of rows: 735

Table truncated, full table size 22 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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