|
| Status |
Public on May 21, 2010 |
| Title |
SNU55 |
| Sample type |
RNA |
| |
|
| Source name |
hepatocellular carcinoma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: hepatocellular carcinoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
5 ug of total RNA from the HCC tissues was used for labeling according to standard protocols recommended by Affymetrix, Inc
|
| |
|
| Hybridization protocol |
Hybridization and detection were performed with Affymetrix Human Genome U133A 2.0 chips according to standard protocols.
|
| Scan protocol |
GeneChips were scanned GeneChip scanner 3000 using GCOS software
|
| Description |
Gene expression data from hepatocellular carcinoma
|
| Data processing |
The data were analyzed with RMA normalization method.
|
| |
|
| Submission date |
Apr 21, 2009 |
| Last update date |
Apr 13, 2010 |
| Contact name |
Hyun Goo Woo |
| Organization name |
Ajou University School of Medicine
|
| Street address |
164 Worldcup-ro, Yeongtong-gu
|
| City |
Suwon |
| ZIP/Postal code |
443-721 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL571 |
| Series (1) |
| GSE15765 |
Identification of cholangiocarcinoma-like gene expression traits in hepatocellular carcinoma |
|
