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Sample GSM400424 Query DataSets for GSM400424
Status Public on May 08, 2009
Title adipose brown 29
Sample type RNA
 
Source name adipose_brown
Organism Mus musculus
Characteristics tissue: adipose brown
Treatment protocol RNA extraction from tissues of naïve male (except females for specific organs) C57BL/6J mice, 8-10 weeks of age
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell pellets using Trizol (Invitrogen, Carlsbad, CA) followed by clean up using the RNeasy kit (Qiagen, Valencia, CA, USA).
Label biotin
Label protocol 2 ug total RNA was used with the GeneChip WT Sense Target Labeling Kit
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures using GCS3000 scanner
Description adipose_brown
Data processing RMA
 
Submission date May 06, 2009
Last update date May 07, 2009
Contact name John R Walker
E-mail(s) jwalker@gnf.org
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL6193
Series (1)
GSE15998 Mouse Exon Atlas

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
4304920 2.044008
4304921 2.458551
4304922 4.751101
4304923 6.333872
4304925 8.569463
4304927 3.999211
4304928 13.487958
4304929 10.263806
4304930 3.272364
4304931 4.827953
4304932 4.904681
4304933 5.697669
4304934 4.096711
4304935 2.255943
4304937 5.114744
4304938 2.452186
4304939 1.729469
4304940 4.282454
4304941 5.30121
4304942 8.378275

Total number of rows: 1201338

Table truncated, full table size 19839 Kbytes.




Supplementary file Size Download File type/resource
GSM400424.CEL.gz 39.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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