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GEO accession:
Sample GSM41244
Query DataSets for GSM41244
Status
Public on Jun 04, 2005
Title
Rep 1 number 2
Sample type
RNA
Channel 1
Source name
K562
Organism
Homo sapiens
Extracted molecule
total RNA
Channel 2
Source name
K562 + RIZ1
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Cell-line K562 with gene RIZ1 (prdm2) vs. K562 with no RIZ1
Keywords = riz1
Submission date
Feb 04, 2005
Last update date
May 29, 2005
Contact name
Matthew Bainbridge
E-mail(s)
mnb922@mail.usask.ca
Phone
(306) 655 2638
Organization name
U of Saskatchewan
Department
Computer Science
Lab
Saskatoon Cancer Centre
Street address
20 Campus Drive
City
Saskatoon
State/province
SK
ZIP/Postal code
S7N H4H
Country
Canada
Platform ID
GPL1843
Series (1)
GSE2243
RIZ1 repression is associated with insulin-like growth factor-1 signaling activation in chronic myeloid leukemia...
Data table header descriptions
ID_REF
F635 Mean
Channel 1 mean value
B635 Mean
Channel 1 mean background value
F532 Mean
Channel 2 mean value
B532 Mean
Channel 2 mean background value
VALUE
log2((F635-B635)/(F532-B532)) after ratio and LOWESS normalization
Data table
ID_REF
F635 Mean
B635 Mean
F532 Mean
B532 Mean
VALUE
1
49
47
49
48
0.21
2
50
48
62
49
-1.174
3
59
47
70
48
-0.686
4
61
47
81
47
-1.263
5
54
46
63
48
-0.053
6
47
46
51
47
-0.079
7
125
44
156
47
-0.206
8
74
46
72
47
0.32
9
107
46
119
46
-0.369
10
66
46
79
47
-0.813
11
95
46
114
48
-0.322
12
116
47
147
50
-0.795
13
66
47
75
48
-0.753
14
111
47
124
48
-0.186
15
87
46
98
48
-0.073
16
280
45
308
48
-0.038
17
303
46
314
48
-0.202
18
49
47
51
48
null
19
141
47
147
48
-0.108
20
152
53
182
52
-0.256
Total number of rows:
43196
Table truncated, full table size
1072 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM41244-Cy3.tif.gz
11.0 Mb
(ftp)
(http)
TIFF
GSM41244-Cy5.tif.gz
10.3 Mb
(ftp)
(http)
TIFF
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