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GEO accession:
Sample GSM41246
Query DataSets for GSM41246
Status
Public on Jun 04, 2005
Title
Rep 2 number 2
Sample type
RNA
Channel 1
Source name
K562
Organism
Homo sapiens
Extracted molecule
total RNA
Channel 2
Source name
K562 + RIZ1
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Cell-line K562 with gene RIZ1 (prdm2) vs. K562 with no RIZ1
Keywords = riz1
Submission date
Feb 04, 2005
Last update date
May 29, 2005
Contact name
Matthew Bainbridge
E-mail(s)
mnb922@mail.usask.ca
Phone
(306) 655 2638
Organization name
U of Saskatchewan
Department
Computer Science
Lab
Saskatoon Cancer Centre
Street address
20 Campus Drive
City
Saskatoon
State/province
SK
ZIP/Postal code
S7N H4H
Country
Canada
Platform ID
GPL1843
Series (1)
GSE2243
RIZ1 repression is associated with insulin-like growth factor-1 signaling activation in chronic myeloid leukemia...
Data table header descriptions
ID_REF
F635 Mean
Channel 1 mean value
B635 Mean
Channel 1 mean background value
F532 Mean
Channel 2 mean value
B532 Mean
Channel 2 mean background value
VALUE
log2((F635-B635)/(F532-B532)) after ratio and LOWESS normalization
Data table
ID_REF
F635 Mean
B635 Mean
F532 Mean
B532 Mean
VALUE
1
117
125
139
150
-0.341
2
142
119
186
148
0.058
3
167
120
237
147
0.438
4
180
121
217
152
-0.183
5
150
121
199
152
0.183
6
130
121
154
150
0.409
7
194
125
254
147
0.956
8
199
127
244
151
0.025
9
261
128
308
146
-0.271
10
149
123
193
148
-0.387
11
218
120
327
144
-0.631
12
343
117
563
147
-0.867
13
166
115
195
141
-0.447
14
323
115
410
143
0.092
15
229
118
256
141
0.189
16
1111
114
1968
144
-0.724
17
1179
123
1245
141
0.201
18
124
135
149
147
null
19
426
133
498
164
0.162
20
454
126
664
144
-0.274
Total number of rows:
43196
Table truncated, full table size
1198 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM41246-Cy3.tif.gz
14.3 Mb
(ftp)
(http)
TIFF
GSM41246-Cy5.tif.gz
13.7 Mb
(ftp)
(http)
TIFF
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