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GEO accession:
Sample GSM41249
Query DataSets for GSM41249
Status
Public on Jun 04, 2005
Title
Rep 3 number 2
Sample type
RNA
Channel 1
Source name
K562
Organism
Homo sapiens
Extracted molecule
total RNA
Channel 2
Source name
K562 + RIZ1
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Cell-line K562 with gene RIZ1 (prdm2) vs. K562 with no RIZ1
Keywords = riz1
Submission date
Feb 04, 2005
Last update date
May 29, 2005
Contact name
Matthew Bainbridge
E-mail(s)
mnb922@mail.usask.ca
Phone
(306) 655 2638
Organization name
U of Saskatchewan
Department
Computer Science
Lab
Saskatoon Cancer Centre
Street address
20 Campus Drive
City
Saskatoon
State/province
SK
ZIP/Postal code
S7N H4H
Country
Canada
Platform ID
GPL1843
Series (1)
GSE2243
RIZ1 repression is associated with insulin-like growth factor-1 signaling activation in chronic myeloid leukemia...
Data table header descriptions
ID_REF
F635 Mean
Channel 1 mean value
B635 Mean
Channel 1 mean background value
F532 Mean
Channel 2 mean value
B532 Mean
Channel 2 mean background value
VALUE
log2((F635-B635)/(F532-B532)) after ratio and LOWESS normalization
Data table
ID_REF
F635 Mean
B635 Mean
F532 Mean
B532 Mean
VALUE
1
63
62
90
77
-0.703
2
60
58
48
45
-0.42
3
67
59
82
56
0.02
4
79
58
142
56
-1.541
5
79
60
142
67
1
6
64
61
96
63
-0.588
7
64
58
86
53
-0.158
8
76
63
109
78
0.932
9
89
63
146
87
-0.196
10
67
60
96
71
-0.39
11
71
59
117
51
-1.111
12
88
58
216
42
-1.073
13
72
57
134
65
-1.178
14
222
64
761
91
-1.351
15
80
65
121
95
0.6
16
263
62
715
83
-0.499
17
223
63
414
82
0.152
18
60
66
76
84
null
19
117
67
218
86
-0.149
20
115
62
242
84
-0.155
Total number of rows:
43196
Table truncated, full table size
1090 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM41249-Cy3.tif.gz
11.9 Mb
(ftp)
(http)
TIFF
GSM41249-Cy5.tif.gz
11.9 Mb
(ftp)
(http)
TIFF
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