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Sample GSM41350 Query DataSets for GSM41350
Status Public on Feb 09, 2005
Title AdERalpha+vehicle JMTM4
Sample type RNA
 
Source name MDA-MB-231
Organism Homo sapiens
Extracted molecule total RNA
 
Description Gene expression changes caused by estrogen treatment of breast cancer cells that re-express ERalpha was investigated by infecting ER-negative MDA-MB-231 breast cancer cells for 24 h with recombinant adenovirus encoding full-length human ERalpha (Ad-ERalpha) or control vector (Ad-LacZ), and treating them with 0ยท01% ethanol (vehicle control) or 10-8 M 17beta-estradiol (E2). After 48 h of treatment, total RNA was isolated and used for transcript profiling on Affymetrix GeneChips. Three independent biological replicates of this experiment were carried out.
 
Submission date Feb 07, 2005
Last update date Oct 28, 2005
Contact name Fei Ling Lim
E-mail(s) fei-ling.lim@unilever.com
Phone +44 (0)1234222450
Organization name Unilever
Street address Colworth Science Park
City Sharnbrook
State/province Bedfordshire
ZIP/Postal code MK44 1LQ
Country United Kingdom
 
Platform ID GPL96
Series (1)
GSE2251 Anti-prolif. effect of E2 in breast cancer cells that re-exp. ERalpha is mediated by aberr. regulat. of cell cycle genes

Data table header descriptions
ID_REF
VALUE Microarray Suite 5.0 raw signal
ABS_CALL Microarray Suite 5.0 presence call - Present, Marginal, or Absent
DETECTION P-VALUE Microarray Suite 5.0 detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 417.2 P 0.004484
AFFX-BioB-M_at 442.9 P 0.000081
AFFX-BioB-3_at 259.5 P 0.00039
AFFX-BioC-5_at 742.1 P 0.000147
AFFX-BioC-3_at 470.5 P 0.000225
AFFX-BioDn-5_at 714.9 P 0.00011
AFFX-BioDn-3_at 4622.6 P 0.000225
AFFX-CreX-5_at 7785 P 0.000044
AFFX-CreX-3_at 13107.9 P 0.000044
AFFX-DapX-5_at 15.2 A 0.250796
AFFX-DapX-M_at 46 M 0.050229
AFFX-DapX-3_at 4.6 A 0.932322
AFFX-LysX-5_at 20.5 A 0.368438
AFFX-LysX-M_at 34.8 A 0.559354
AFFX-LysX-3_at 5.9 A 0.41138
AFFX-PheX-5_at 7.4 A 0.712257
AFFX-PheX-M_at 3.8 A 0.814869
AFFX-PheX-3_at 14.2 A 0.712257
AFFX-ThrX-5_at 7.2 A 0.960339
AFFX-ThrX-M_at 5.9 A 0.772364

Total number of rows: 22283

Table truncated, full table size 593 Kbytes.




Supplementary data files not provided

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