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Sample GSM41510

Query DataSets for GSM41510

Status

Public on Oct 04, 2005

Title

Control d 10 (5)

Sample type

RNA

Source name

testis

Organism

Mus musculus

Extracted molecule

total RNA

Description

RNA from 1 testis from three 10 day old control (AMHCre) mice. Immediately after removal, testis samples were snap-frozen and stored in liquid nitrogen. Before RNA extraction, testis samples were weighed and homogenized in a Dounce homogenizer. Thereafter RNA was isolated with the QIAGEN RNeasy Kit (Chatsworth, CA) according to the manufacturers instructions, encompassing an on-column DNaseI-treatment of the RNA.
Keywords = SCARKO
Keywords = testis
Keywords = spermatogenesis
Keywords = androgens
Keywords = microarray
Keywords = Pem
Keywords = serine protease inhibitor

Submission date

Feb 09, 2005

Last update date

Mar 18, 2009

Contact name

Rekin's Janky

E-mail(s)

Nucleomics.Bioinformatics@vib.be

Organization name

VIB

Department

Nucleomics Core

Street address

Herestraat 49 Box 816

City

Leuven

ZIP/Postal code

B-3000

Country

Belgium

Platform ID

GPL8321

Series (2)

GSE2259	Testicular gene expression in SCARKO mice during prepuberty
GSE2260	Testicular gene expression in SCARKO mice at day 10

Data table header descriptions
ID_REF
ANALYSIS_NAME	Hybridisation identification
VALUE	Signal
ABS_CALL	Absolute detection call
DETECTION P-VALUE	Detection P-Value

Data table
ID_REF	ANALYSIS_NAME	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	hyb892	87.8	P	0.000127
AFFX-BioB-M_at	hyb892	148.3	P	0.000044
AFFX-BioB-3_at	hyb892	87.3	P	0.000044
AFFX-BioC-5_at	hyb892	170	P	0.000044
AFFX-BioC-3_at	hyb892	188.9	P	0.000044
AFFX-BioDn-5_at	hyb892	285.8	P	0.000044
AFFX-BioDn-3_at	hyb892	826.2	P	0.000044
AFFX-CreX-5_at	hyb892	1951.1	P	0.000052
AFFX-CreX-3_at	hyb892	2421.1	P	0.000044
AFFX-DapX-5_at	hyb892	2.6	A	0.195266
AFFX-DapX-M_at	hyb892	1.3	A	0.559354
AFFX-DapX-3_at	hyb892	0.4	A	0.953518
AFFX-LysX-5_at	hyb892	0.3	A	0.574044
AFFX-LysX-M_at	hyb892	0.3	A	0.843268
AFFX-LysX-3_at	hyb892	1.8	A	0.205732
AFFX-PheX-5_at	hyb892	0.2	A	0.953518
AFFX-PheX-M_at	hyb892	0.2	A	0.971543
AFFX-PheX-3_at	hyb892	4	A	0.147939
AFFX-ThrX-5_at	hyb892	0.2	A	0.932322
AFFX-ThrX-M_at	hyb892	0.3	A	0.617411

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM41510.CEL.gz	3.4 Mb	(ftp)(http)	CEL