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GEO accession:
Sample GSM47309
Query DataSets for GSM47309
Status
Public on Apr 06, 2005
Title
48hr control for TNFa-treated keratinocytes
Sample type
RNA
Source name
Keratinocytes
Organism
Homo sapiens
Extracted molecule
total RNA
Description
~70% confluent keratinocytes in the TNFa experiment, 48h control, untreated
Keywords = Epidermis Keratinocytes TNFa Untreated
Submission date
Apr 04, 2005
Last update date
Mar 16, 2009
Contact name
Miroslav Blumenberg
E-mail(s)
miroslav.blumenberg@nyumc.org
Phone
212 263-5924
Organization name
NYU School of Medicine
Department
Dermatology
Lab
Blumenberg
Street address
455 First Ave #874
City
New York
State/province
NY
ZIP/Postal code
10016
Country
USA
Platform ID
GPL8300
Series (1)
GSE2489
TNF & Parthenolide treatment of keratinocytes
Data table header descriptions
ID_REF
VALUE
Normalized expression
ABS_CALL
Affy P, A, M Tomo C48 2nd label U95Av2 chip_Detection
DETECTION P-VALUE
Affy detection p value Tomo C48 2nd label U95Av2 chip_Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
24.5
A
0.52976
AFFX-MurIL10_at
3.8
A
0.712257
AFFX-MurIL4_at
7.2
A
0.368427
AFFX-MurFAS_at
6.2
A
0.425962
AFFX-BioB-5_at
391.1
P
0.000509
AFFX-BioB-M_at
864.2
P
0.000044
AFFX-BioB-3_at
458.8
P
0.000044
AFFX-BioC-5_at
1100.2
P
0.000052
AFFX-BioC-3_at
839.3
P
0.000044
AFFX-BioDn-5_at
1126.4
P
0.000044
AFFX-BioDn-3_at
4238.5
P
0.00007
AFFX-CreX-5_at
4956.3
P
0.000044
AFFX-CreX-3_at
5620.3
P
0.000044
AFFX-BioB-5_st
29.4
A
0.275146
AFFX-BioB-M_st
27.7
A
0.58862
AFFX-BioB-3_st
9.7
A
0.814869
AFFX-BioC-5_st
4
A
0.921998
AFFX-BioC-3_st
19.8
A
0.327079
AFFX-BioDn-5_st
78.8
A
0.089478
AFFX-BioDn-3_st
62.6
M
0.058444
Total number of rows:
12625
Table truncated, full table size
308 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM47309.CEL.gz
2.7 Mb
(ftp)
(http)
CEL
GSM47309.EXP.gz
301 b
(ftp)
(http)
EXP
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