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GEO accession:
Sample GSM47320
Query DataSets for GSM47320
Status
Public on Apr 06, 2005
Title
Parthenolide-pretreated, 48hr TNFa-treated keratinocytes
Sample type
RNA
Source name
Keratinocytes
Organism
Homo sapiens
Extracted molecule
total RNA
Description
~70% confluent keratinocytes in the TNFa experiment, parthenolide-pretreated, then 48h treated with TNFa
Keywords = Epidermis Keratinocytes TNFa Inflammation
Keywords = NFkB
Submission date
Apr 04, 2005
Last update date
Mar 16, 2009
Contact name
Miroslav Blumenberg
E-mail(s)
miroslav.blumenberg@nyumc.org
Phone
212 263-5924
Organization name
NYU School of Medicine
Department
Dermatology
Lab
Blumenberg
Street address
455 First Ave #874
City
New York
State/province
NY
ZIP/Postal code
10016
Country
USA
Platform ID
GPL8300
Series (1)
GSE2489
TNF & Parthenolide treatment of keratinocytes
Data table header descriptions
ID_REF
VALUE
Normalized expression
ABS_CALL
Affy P, A, M Tomo TP48 2nd label U95Av2 chip_Detection
DETECTION P-VALUE
Affy detection p value Tomo TP48 2nd label U95Av2 chip_Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
8.2
A
0.699394
AFFX-MurIL10_at
29.7
A
0.368438
AFFX-MurIL4_at
4.9
A
0.58862
AFFX-MurFAS_at
9.7
A
0.368438
AFFX-BioB-5_at
315.2
P
0.000857
AFFX-BioB-M_at
656.7
P
0.000052
AFFX-BioB-3_at
205.5
P
0.000052
AFFX-BioC-5_at
747.4
P
0.00006
AFFX-BioC-3_at
546.2
P
0.000044
AFFX-BioDn-5_at
687.8
P
0.000044
AFFX-BioDn-3_at
3150.6
P
0.00011
AFFX-CreX-5_at
3925.7
P
0.000044
AFFX-CreX-3_at
4865.9
P
0.000044
AFFX-BioB-5_st
33.3
A
0.175328
AFFX-BioB-M_st
24.9
A
0.58862
AFFX-BioB-3_st
10.5
A
0.843268
AFFX-BioC-5_st
7.8
A
0.772364
AFFX-BioC-3_st
2.7
A
0.712257
AFFX-BioDn-5_st
9.4
A
0.340661
AFFX-BioDn-3_st
65.1
A
0.089478
Total number of rows:
12625
Table truncated, full table size
308 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM47320.CEL.gz
2.8 Mb
(ftp)
(http)
CEL
GSM47320.EXP.gz
471 b
(ftp)
(http)
EXP
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