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Sample GSM507939 Query DataSets for GSM507939
Status Public on May 24, 2010
Title Psoriasis BDCA- P2
Sample type RNA
 
Source name Psoriasis BDCA-
Organism Homo sapiens
Characteristics group: BDCA1-
patient: P2
Extracted molecule total RNA
Extraction protocol Cells lysed in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
Label biotin
Label protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
 
Hybridization protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Description LZ_Psor_BDCA1minus_P2.CEL
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Feb 10, 2010
Last update date May 24, 2010
Contact name Mayte Suarez-Farinas
E-mail(s) mayte.suarezfarinas@mssm.edu
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE20264 Transcriptome of inflammatory myeloid DCs in psoriasis

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 7.77560624
1053_at 6.541732746
117_at 5.699229406
121_at 4.51648949
1255_g_at 2.234136504
1294_at 3.9869127
1316_at 3.446167797
1320_at 2.635213044
1405_i_at 6.646568006
1431_at 2.697969736
1438_at 2.242967009
1487_at 4.716498806
1494_f_at 2.589107192
1598_g_at 7.268473186
160020_at 2.419710509
1729_at 10.64302787
1773_at 1.961506484
177_at 3.339512963
179_at 1.742387971
1861_at 3.396054966

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM507939.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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