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Sample GSM507940 Query DataSets for GSM507940
Status Public on May 24, 2010
Title Psoriasis BDCA- P3
Sample type RNA
 
Source name Psoriasis BDCA-
Organism Homo sapiens
Characteristics group: BDCA1-
patient: P3
Extracted molecule total RNA
Extraction protocol Cells lysed in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
Label biotin
Label protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
 
Hybridization protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Description LZ_Psor_BDCA1minus_P3.CEL
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Feb 10, 2010
Last update date May 24, 2010
Contact name Mayte Suarez-Farinas
E-mail(s) mayte.suarezfarinas@mssm.edu
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE20264 Transcriptome of inflammatory myeloid DCs in psoriasis

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 6.999898718
1053_at 6.988004544
117_at 9.449459398
121_at 4.724787648
1255_g_at 2.211479771
1294_at 4.621237473
1316_at 3.335401989
1320_at 2.582586719
1405_i_at 4.554949599
1431_at 2.669771874
1438_at 2.223964474
1487_at 4.834079823
1494_f_at 2.543067924
1598_g_at 6.774399466
160020_at 2.396964898
1729_at 9.472876766
1773_at 1.897215375
177_at 3.43960539
179_at 1.720295725
1861_at 3.350547832

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.




Supplementary file Size Download File type/resource
GSM507940.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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