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| Status |
Public on May 24, 2010 |
| Title |
Psoriasis BDCA+ P2 |
| Sample type |
RNA |
| |
|
| Source name |
Psoriasis BDCA+
|
| Organism |
Homo sapiens |
| Characteristics |
group: BDCA1+
patient: P2
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cells lysed in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
|
| Label |
biotin
|
| Label protocol |
GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
|
| |
|
| Hybridization protocol |
GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
|
| Scan protocol |
Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
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| Description |
LZ_Psor_BDCA1plus_P2.CEL
|
| Data processing |
GCRMA (using gcrma package from R/Bioconductor)
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| |
|
| Submission date |
Feb 10, 2010 |
| Last update date |
May 24, 2010 |
| Contact name |
Mayte Suarez-Farinas |
| E-mail(s) |
mayte.suarezfarinas@mssm.edu
|
| Organization name |
Mount SinaiSchool of Medicine
|
| Street address |
1425 Madison Ave, L2-70C, Box 1077,
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10075 |
| Country |
USA |
| |
|
| Platform ID |
GPL571 |
| Series (1) |
| GSE20264 |
Transcriptome of inflammatory myeloid DCs in psoriasis |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Normalized Expression values in log-2 scale |
| Data table |
| ID_REF |
VALUE |
| 1007_s_at |
8.16172337 |
| 1053_at |
7.537384929 |
| 117_at |
3.981136748 |
| 121_at |
4.350621585 |
| 1255_g_at |
2.218439613 |
| 1294_at |
5.229136573 |
| 1316_at |
3.355681467 |
| 1320_at |
2.631227274 |
| 1405_i_at |
6.244273968 |
| 1431_at |
2.677971858 |
| 1438_at |
2.231422532 |
| 1487_at |
4.865374675 |
| 1494_f_at |
2.549068829 |
| 1598_g_at |
7.971359672 |
| 160020_at |
2.40233806 |
| 1729_at |
10.96550794 |
| 1773_at |
1.90515953 |
| 177_at |
3.123653339 |
| 179_at |
1.727430097 |
| 1861_at |
3.523030916 |
Total number of rows: 22277
Table truncated, full table size 496 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM507943.CEL.gz |
3.2 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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