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Sample GSM52623

Query DataSets for GSM52623

Status

Public on Jun 03, 2005

Title

Affy 2X Tumor Sample 1

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 28, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	279.687151
AFFX-BioB-M_at	309.484128
AFFX-BioB-3_at	225.9604166
AFFX-BioC-5_at	675.2463348
AFFX-BioC-3_at	820.5220376
AFFX-BioDn-5_at	1602.868289
AFFX-BioDn-3_at	3194.376094
AFFX-CreX-5_at	8290.580135
AFFX-CreX-3_at	9671.448519
AFFX-DapX-5_at	39.38652031
AFFX-DapX-M_at	599.3760933
AFFX-DapX-3_at	2299.318307
AFFX-LysX-5_at	23.98857216
AFFX-LysX-M_at	118.8811564
AFFX-LysX-3_at	272.0403405
AFFX-PheX-5_at	35.05818563
AFFX-PheX-M_at	194.8399756
AFFX-PheX-3_at	322.8164255
AFFX-ThrX-5_at	49.02317667
AFFX-ThrX-M_at	146.3097453

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52623.CEL.gz	3.3 Mb	(ftp)(http)	CEL
GSM52623.EXP.gz	371 b	(ftp)(http)	EXP