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Sample GSM52631

Query DataSets for GSM52631

Status

Public on Jun 03, 2005

Title

Ambion 2X Tumor Sample 3

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 28, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	200.6740237
AFFX-BioB-M_at	219.8050125
AFFX-BioB-3_at	193.989484
AFFX-BioC-5_at	488.2381866
AFFX-BioC-3_at	610.117205
AFFX-BioDn-5_at	1112.378487
AFFX-BioDn-3_at	2683.901419
AFFX-CreX-5_at	7565.075622
AFFX-CreX-3_at	8639.075354
AFFX-DapX-5_at	14.28980307
AFFX-DapX-M_at	11.22290773
AFFX-DapX-3_at	10.59181687
AFFX-LysX-5_at	10.78502195
AFFX-LysX-M_at	13.17869925
AFFX-LysX-3_at	10.33189814
AFFX-PheX-5_at	12.32872155
AFFX-PheX-M_at	12.60845363
AFFX-PheX-3_at	65.17474181
AFFX-ThrX-5_at	22.92562739
AFFX-ThrX-M_at	11.9975528

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52631.CEL.gz	3.4 Mb	(ftp)(http)	CEL
GSM52631.EXP.gz	366 b	(ftp)(http)	EXP