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Sample GSM534232 Query DataSets for GSM534232
Status Public on Jan 01, 2011
Title d3 -LIF +CsA replicate 1
Sample type RNA
 
Source name CGR8 ES cells
Organism Mus musculus
Characteristics strain: 129P2/Ola
cell line: CGR8
protocol: d3 -LIF +CsA
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data were normalised using cubic spline with IlluminaGUI in R
 
Submission date Apr 19, 2010
Last update date Jan 01, 2011
Contact name Xiang Li
Organization name Institute of Health Sciences
Street address 225 South Chongqing Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200025
Country China
 
Platform ID GPL6105
Series (1)
GSE21378 Genome-wide analysis of gene expression regulated by calcineurin-NFAT signaling in mouse embryonic stem cells

Data table header descriptions
ID_REF
VALUE Cubic spline normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 60.98832 0
ILMN_1212603 -9.367201 0.8244681
ILMN_1212605 606.2803 0
ILMN_1212607 -3.851824 0.5797873
ILMN_1212608 -0.4048232 0.4321809
ILMN_1212610 -7.969893 0.7672873
ILMN_1212612 6.35286 0.2433511
ILMN_1212614 -0.1183999 0.4168883
ILMN_1212616 4.687318 0.2819149
ILMN_1212619 36.50846 0
ILMN_1212623 -0.02629738 0.412234
ILMN_1212625 2380.017 0
ILMN_1212626 2.919768 0.318484
ILMN_1212628 -0.7835015 0.4481383
ILMN_1212632 47.5793 0
ILMN_1212633 75.1442 0
ILMN_1212636 2685.533 0
ILMN_1212637 2506.58 0
ILMN_1212639 257.7994 0
ILMN_1212644 10.25331 0.1582447

Total number of rows: 46632

Table truncated, full table size 1334 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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