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Sample GSM534237 Query DataSets for GSM534237
Status Public on Jan 01, 2011
Title d1 deltaCnA replicate 2
Sample type RNA
 
Source name ideltaCnAES cells
Organism Mus musculus
Characteristics strain: 129P2/Ola
cell line: CGR8
protocol: d1 deltaCnA
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data were normalised using cubic spline with IlluminaGUI in R
 
Submission date Apr 19, 2010
Last update date Jan 01, 2011
Contact name Xiang Li
Organization name Institute of Health Sciences
Street address 225 South Chongqing Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200025
Country China
 
Platform ID GPL6105
Series (1)
GSE21378 Genome-wide analysis of gene expression regulated by calcineurin-NFAT signaling in mouse embryonic stem cells

Data table header descriptions
ID_REF
VALUE Cubic spline normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 33.69729 0
ILMN_1212603 -0.7295174 0.4551495
ILMN_1212605 408.0168 0
ILMN_1212607 -0.9451852 0.4611296
ILMN_1212608 0.8862459 0.392691
ILMN_1212610 -2.053109 0.4930232
ILMN_1212612 0.5761356 0.4039867
ILMN_1212614 -5.253346 0.6465116
ILMN_1212616 -2.895221 0.5348837
ILMN_1212619 -1.339726 0.4730897
ILMN_1212623 -2.257604 0.4963455
ILMN_1212625 3169.745 0
ILMN_1212626 21.28847 0.0538206
ILMN_1212628 -2.57188 0.5129568
ILMN_1212632 236.104 0
ILMN_1212633 62.89307 0
ILMN_1212636 3040.691 0
ILMN_1212637 1434.82 0
ILMN_1212639 233.7413 0
ILMN_1212644 8.933952 0.2053156

Total number of rows: 46632

Table truncated, full table size 1338 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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