|
| Status |
Public on Jun 22, 2023 |
| Title |
Patient31 meningioma |
| Sample type |
genomic |
| |
|
| Source name |
meningioma
|
| Organism |
Homo sapiens |
| Characteristics |
prior sample id: 678
Sex: FEMALE
age: 68
who grade: II
reoperation: Unknown
progression: Unknown
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Tumor/dura samples were obtained at the time of surgery. DNA was extracted using Qiagen DNeasy Blood & Tissue Kit (Cat No./ID: 69506).
|
| Label |
Cy5 and Cy3
|
| Label protocol |
standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
|
| |
|
| Hybridization protocol |
standard Illumina HumanOmni-Express v12.1 BeadChip SNP array protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
meningioma
|
| Data processing |
Data were analyzed in Illumina GenomeStudio v2.0.5 with cnvPartition Plug-in v3.2.1
Genotype: AA,AB,BB,or NC (no call)
|
| |
|
| Submission date |
Jun 09, 2021 |
| Last update date |
Jun 22, 2023 |
| Contact name |
Michelle Ariana Wedemeyer |
| E-mail(s) |
michelle.ariana.wedemeyer@gmail.com
|
| Organization name |
University of Southern California
|
| Department |
Neurosurgery
|
| Street address |
1200 N State St, Suite 3300
|
| City |
Los Angeles |
| State/province |
California |
| ZIP/Postal code |
90033 |
| Country |
USA |
| |
|
| Platform ID |
GPL18900 |
| Series (2) |
| GSE176457 |
DNA Methylation Signatures Differentiate Meningiomas from Normal Dura [OmniSNP] |
| GSE178143 |
DNA Methylation Signatures Differentiate Meningiomas from Normal Dura |
|
