NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM617628 Query DataSets for GSM617628
Status Public on Nov 05, 2010
Title Prostate cancer primary tumor PR47
Sample type RNA
 
Source name Human prostate cancer
Organism Homo sapiens
Characteristics tissue: Prostate cancer primary tumor
recurrence status: Non-Recurrent
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label biotin
Label protocol Biotinylated cRNA was prepared according to standard Affymetrix protocols
 
Hybridization protocol Following fragmentation, cRNA was hybridized to one U133A Affymetrix GeneChip.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description PR47
Prostate cancer primary tumor
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Nov 04, 2010
Last update date Nov 04, 2010
Contact name Steve Goodison
Organization name M. D. Anderson Cancer Center Orlando
Department Cancer Research Institute
Street address 6900 Lake Nona Blvd
City Orlando
ZIP/Postal code 32827
Country USA
 
Platform ID GPL96
Series (1)
GSE25136 Optimizing molecular signatures for prostate cancer recurrence

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 758.1
1053_at 1935.1
117_at 558.1
121_at 1507.7
1255_g_at 1475.8
1294_at 1979.4
1316_at 12010.6
1320_at 17968.7
1405_i_at 24034.5
1431_at 6.5
1438_at 63.8
1487_at 10.7
1494_f_at 29
1598_g_at 14.2
160020_at 4.1
1729_at 3.7
1773_at 3.3
177_at 26.6
179_at 23.1
1861_at 60.4

Total number of rows: 22283

Table truncated, full table size 360 Kbytes.




Supplementary file Size Download File type/resource
GSM617628.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap