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Status
Public on Aug 20, 2005
Title
A3H1exp3
Sample type
RNA
Channel 1
Source name
A3H1exp3Cy3
Organism
Mus musculus
Characteristics
Channel1 1st hybridization exp3
Treatment protocol
exp3 liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from naïve gene deficient Rag-/- knock-out (KO) mice
Extracted molecule
total RNA
Label
Cy3
Channel 2
Source name
A3H1exp3Cy5
Organism
Mus musculus
Characteristics
Channel2 1st hybridization exp3
Treatment protocol
exp3 liver CD3 negative/NK1.1 positive cells purified by magnetic cell sorting (MACS) followed by fluorescence activated cell sorting (FACS) with antibody and tetramer staining from Listeria monocytogenes infected gene deficient Rag-/- knock-out (KO) mice
Extracted molecule
total RNA
Label
Cy5
Description
hybridization on new microarray
Data processing
Agilent FE7.5 / Rosetta Resover V5.0
Submission date
Jun 20, 2005
Last update date
Jun 23, 2005
Contact name
Hans-Joachim Mollenkopf
E-mail(s)
mollenkopf@mpiib-berlin.mpg.de
Phone
+49 30 28460 482
Organization name
Max-Planck-Institute for Infection Biology
Lab
Microarray/Genomics Core Facility
Street address
Charitéplatz 1
City
Berlin
ZIP/Postal code
10117
Country
Germany
Platform ID
GPL1868
Series (1)
Data table header descriptions
ID_REF
Fold Change
P-value
Intensity1
Intensity2
Log(Intensity)
Ratio
VALUE
Log(Error)
X Dev
Sequence Name(s)
Sequence Code
Accession #
Sequence Description
Data table
ID_REF
Fold Change
P-value
Intensity1
Intensity2
Log(Intensity)
Ratio
VALUE
Log(Error)
X Dev
Sequence Name(s)
Sequence Code
Accession #
Sequence Description
633390
1.21406
0.51515
148.02707
179.70433
2.20299
1.21406
0.08424
0.12943
0.65085
"Fprl1,Lxa4r,LXA4-R"
NM_008042
NM_008042
formyl peptide receptor-like 1
633391
1.24855
0.06199
34431.30469
43831.10156
4.57396
1.24855
0.0964
0.05165
1.8664
"Tslpr,CRLM2,Ly114"
NM_016715
NM_016715
"thymic stromal-derived lymphopoietin, receptor"
633392
1.27242
0.00759
13225.39062
16878.09961
4.16838
1.27242
0.10463
0.03919
2.66979
AI256499
AI256499
AI256499
"EST, Weakly similar to 0806162A ATPase 6 [M.musculus]"
633393
1.05964
0.80135
99207.00781
105122.9453
5.00912
1.05964
0.02516
0.1
0.2516
AI462013
AI462013
AI462013
"ESTs, Highly similar to HYPOTHETICAL 272.0 KD PROTEIN C50C3.6 IN CHROMOSOME III [Caenorhabditis elegans]"
633394
1.2021
0.64305
128.71051
158.08597
2.1355
1.2021
0.07994
0.17249
0.46344
AI662810
AI662810
AI662810
ESTs
633395
1.54829
0.06624
59.0787
91.11395
1.85931
1.54829
0.18985
0.10336
1.8368
Il9r
NM_008374
NM_008374
interleukin 9 receptor
633396
1.03951
0.80629
290.20288
292.26144
2.45349
1.03951
0.01683
0.06864
0.24521
"Pcyt1a,Ctpct,CTalpha,Cttalpha"
NM_009981
NM_009981
"phosphate cytidylyltransferase 1, choline, alpha isoform"
633397
1.11354
0.59582
380.34723
399.62445
2.57498
1.11354
0.04671
0.08805
0.53042
"Mtr,MS,D830038K18Rik"
AI894170
AI894170
"ESTs, Moderately similar to 5-METHYLTETRAHYDROFOLATE--HOMOCYSTEINE METHYLTRANSFERASE [Escherichia coli]"
633398
1.04866
0.59957
106381.3359
111129.5469
5.02642
1.04866
0.02063
0.0393
0.52503
AW455556
AW455556
AW455556
"ESTs, Weakly similar to CG11399 gene product [D.melanogaster]"
633399
1.21195
0.12534
154.33824
187.09349
2.2299
1.21195
0.08348
0.05447
1.53275
"Ccl8,HC14,Mcp2,MCP-2,Scya8,1810063B20Rik"
NM_021443
NM_021443
cDNA sequence AB023418
633400
-1.4885
0.00079
32639.60352
21503.69336
4.40729
0.67182
-0.17275
0.05148
-3.35565
AI451221
AI451221
AI451221
ESTs
633401
2.67362
9.36E-24
1448.96899
3893.40601
3.37067
2.67362
0.4271
0.04251
10.04815
AI448098
AI448098
AI448098
ESTs
633402
-1.4127
0.00276
1796.70874
1253.39844
3.16583
0.70786
-0.15005
0.05013
-2.9932
BE946070
BE946070
BE946070
"ESTs, Weakly similar to ORF YKL201c [S.cerevisiae]"
633403
1.95652
0.05194
87.62595
141.89493
1.95692
1.95652
0.29148
0.14997
1.9436
"Prkg1,CGKI,Prkg1b,Prkgr1b"
NM_011160
NM_011160
"protein kinase, cGMP-dependent, type I"
633404
1.08964
0.29627
4241.58936
4620.30176
3.63654
1.08964
0.03729
0.0357
1.04446
BF456565
BF456565
BF456565
"ESTs, Weakly similar to putative membrane associated progesterone receptor component [M.musculus]"
633405
1.09227
0.6156
479.25153
513.33948
2.69121
1.09227
0.03833
0.07634
0.50209
"Htr1a,Gpcr18"
NM_008308
NM_008308
5-hydroxytryptamine (serotonin) receptor 1A
633406
1.03976
0.67375
2232.4353
2310.14746
3.34611
1.03976
0.01693
0.04022
0.42101
"Jun,AP-1,Junc,c-jun"
NM_010591
NM_010591
Jun oncogene
633407
1.43546
0.32494
158.52621
235.26688
2.26585
1.43546
0.15699
0.15949
0.98435
AV254337
AV254337
AV254337
"EST, Moderately similar to NEK1_MOUSE SERINE/THREONINE-PROTEIN KINASE NEK1 [M.musculus]"
633408
1.66136
3.50E-02
128.09789
210.45297
2.2004
1.66136
0.22046
0.10454
2.10892
"Oprd1,Nbor,mDOR,DOR-1"
NM_013622
NM_013622
"opioid receptor, delta 1"
633409
-1.07055
0.46405
3790.96631
3519.72925
3.54751
0.9341
-0.02961
0.04043
-0.7322
AV374708
AV374708
AV374708
"ESTs, Highly similar to implantation-associated protein [R.norvegicus]"
Total number of rows: 8014 Table truncated, full table size 1228 Kbytes .Supplementary data files not provided