|
| Status |
Public on Apr 08, 2011 |
| Title |
normal_lung_fibroblast_cell_line971 |
| Sample type |
genomic |
| |
|
| Source name |
Normal lung
|
| Organism |
Homo sapiens |
| Characteristics |
age: 77
Sex: M
cell line: normal lung fibroblast cell line (NF)
histology: Normal lung parenchyma
Stage: null
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted using DNeasy blood and tissue kit (Qiagen, cat# 69504) following DNeasy 96 protocol.
|
| Label |
biotin
|
| Label protocol |
Standard Illumina protocol; Illumina Infinium Genotyping multi use kit
|
| |
|
| Hybridization protocol |
Standard Illumina protocol 48C, 17.5 Hours
|
| Scan protocol |
Standard Illumina protocol on iScan (Illumina)
|
| Description |
NF971
Genome variation profiling by SNP array
|
| Data processing |
Standard Illumina protocol for Infinium Human Genotyping beadchips Beadchip quantificatin and processing in GenomeStudio v2010.2
|
| |
|
| Submission date |
Feb 14, 2011 |
| Last update date |
Apr 08, 2011 |
| Contact name |
Ming-Sound Tsao |
| E-mail(s) |
Ming.Tsao@uhn.on.ca
|
| Phone |
(416) 946-4426
|
| Organization name |
Ontario Cancer Institute/ Princess Margaret Hospital
|
| Street address |
|
| City |
Toronto |
| ZIP/Postal code |
M5G 2M9 |
| Country |
Canada |
| |
|
| Platform ID |
GPL13135 |
| Series (2) |
| GSE22874 |
Prognostic Gene Expression Signature of Carcinoma Associated Fibroblasts in Non-Small Cell Lung Cancer |
| GSE27289 |
Prognostic Gene Expression Signature of Carcinoma Associated Fibroblasts in Non-Small Cell Lung Cancer [genome variation profiling] |
|
