|
Status |
Public on Jul 01, 2011 |
Title |
P10, PRE, ANL non-lesional |
Sample type |
RNA |
|
|
Source name |
P10, PRE, ANL
|
Organism |
Homo sapiens |
Characteristics |
treatment: NB-UVB patient: P10 time: pre-treatment tissue: non-lesional skin scorad: 0
|
Extracted molecule |
total RNA |
Extraction protocol |
Qiagen RNeasy Kit protocol
|
Label |
biotin
|
Label protocol |
standard GeneChip Affymetrix protocol
|
|
|
Hybridization protocol |
standard GeneChip Affymetrix protocol
|
Scan protocol |
Hewlett–Packard Gene Array Scanner
|
Data processing |
GCRMA (using gcrma package from R/Bioconductor). Each platform was preprocess separately, then merged. An extra quantile normalization was needed to normalized across platforms.
|
|
|
Submission date |
Mar 10, 2011 |
Last update date |
Jul 01, 2011 |
Contact name |
Mayte Suarez-Farinas |
E-mail(s) |
mayte.suarezfarinas@mssm.edu
|
Organization name |
Mount SinaiSchool of Medicine
|
Street address |
1425 Madison Ave, L2-70C, Box 1077,
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10075 |
Country |
USA |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE27887 |
Reversal of Atopic Dermatitis with Narrow-Band UVB Phototherapy and Biomarkers for Therapeutic Response |
|