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Sample GSM702395 Query DataSets for GSM702395
Status Public on Feb 21, 2012
Title T2_Post_Male_Old (81364)
Sample type RNA
 
Source name Vastus lateralis muscle
Organism Homo sapiens
Characteristics age: Old
gender: Male
training state: Untrained
time point: 4hrs post exercise
tissue: Vastus lateralis muscle
Extracted molecule total RNA
Extraction protocol Homogenize the muscle tissue in TRI reagent and extracted RNA according to manufacturer's protocol, and then purified using Rneasy Micro Kit (Qiagen).
Label biotin
Label protocol 40ng of total RNA was labeled using NuGen WT-Ovation RNA Amp v2 kit and protocol
 
Hybridization protocol Affymetrix Fluidics Station 400
Scan protocol Affymetrix GeneChip Scanner 3000 7G
Description EA08017_81364_AGEX_OM_T2_2_H133+.CHP
EA08017_81364_AGEX_OM_T2_2_H133+.CEL
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Apr 06, 2011
Last update date Feb 21, 2012
Contact name Shawn T. Estrem
Organization name Eli Lilly and Company
Street address Lilly Corporate Center
City Indianapolis
ZIP/Postal code 46285
Country USA
 
Platform ID GPL570
Series (1)
GSE28422 Effects of resistance exercise and resistance training on the skeletal muscle transcriptome in young and old adults

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 9914.52 P 4.42873e-05
AFFX-BioB-M_at 17782.1 P 4.42873e-05
AFFX-BioB-3_at 13141.1 P 4.42873e-05
AFFX-BioC-5_at 30528.5 P 4.42873e-05
AFFX-BioC-3_at 23593.7 P 4.42873e-05
AFFX-BioDn-5_at 65823 P 4.42873e-05
AFFX-BioDn-3_at 91207.6 P 4.42873e-05
AFFX-CreX-5_at 184301 P 5.16732e-05
AFFX-CreX-3_at 184879 P 4.42873e-05
AFFX-DapX-5_at 44.488 A 0.227636
AFFX-DapX-M_at 21.513 A 0.794268
AFFX-DapX-3_at 4.05549 A 0.966323
AFFX-LysX-5_at 22.2732 A 0.48511
AFFX-LysX-M_at 52.5581 A 0.185131
AFFX-LysX-3_at 3.06444 A 0.9273
AFFX-PheX-5_at 21.2337 A 0.5
AFFX-PheX-M_at 7.48784 A 0.891021
AFFX-PheX-3_at 68.2706 A 0.287743
AFFX-ThrX-5_at 11.3783 A 0.699394
AFFX-ThrX-M_at 10.45 A 0.724854

Total number of rows: 54675

Table truncated, full table size 1656 Kbytes.




Supplementary file Size Download File type/resource
GSM702395.CEL.gz 4.8 Mb (ftp)(http) CEL
GSM702395.CHP.gz 295.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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