GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM72728
Query DataSets for GSM72728
Status
Public on Jun 01, 2006
Title
DLD1
Sample type
RNA
Source name
Colon Carcinoma
Organism
Homo sapiens
Characteristics
See description from American Tissue Culture Collection (ATCC)
Treatment protocol
Untreated
Extracted molecule
total RNA
Extraction protocol
RNeasy mini (Qaigen)
Label
Biotin
Label protocol
Affymetrix
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
Control Sample
Data processing
MAS5.0
Submission date
Aug 30, 2005
Last update date
Mar 27, 2006
Contact name
Damian Darren Medici
E-mail(s)
damian_medici@hms.harvard.edu
Organization name
Harvard Medical School
Department
Cell Biology
Street address
188 Longwood Ave. REB 413
City
Boston
State/province
MA
ZIP/Postal code
01238
Country
USA
Platform ID
GPL570
Series (1)
GSE3229
Beta-catenin/LEF-1 induced epithelial-mesenchymal transition in DLD1 colon carcinoma cells
Data table header descriptions
ID_REF
VALUE
Signal (MAS5)
ABS_CALL
Flags
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
1952.7
P
AFFX-BioB-M_at
3081.2
P
AFFX-BioB-3_at
1565.1
P
AFFX-BioC-5_at
6108.7
P
AFFX-BioC-3_at
7576.2
P
AFFX-BioDn-5_at
13468.7
P
AFFX-BioDn-3_at
33950
P
AFFX-CreX-5_at
56353.3
P
AFFX-CreX-3_at
72241.8
P
AFFX-DapX-5_at
1229.2
P
AFFX-DapX-M_at
3622.1
P
AFFX-DapX-3_at
7203.2
P
AFFX-LysX-5_at
274.7
P
AFFX-LysX-M_at
425.9
P
AFFX-LysX-3_at
820.5
P
AFFX-PheX-5_at
263.4
P
AFFX-PheX-M_at
416.5
P
AFFX-PheX-3_at
668.8
P
AFFX-ThrX-5_at
163.5
P
AFFX-ThrX-M_at
688.8
P
Total number of rows:
54675
Table truncated, full table size
973 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
