|
| Status |
Public on Dec 31, 2011 |
| Title |
medulloblastoma_20 |
| Sample type |
RNA |
| |
|
| Source name |
fresh frozen tissue
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: medulloblastoma
Sex: M
age(month): 96
histology: Anaplastic
seeding(metastasis): N
follow_up_time(month): 24
death: death
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted using the QIAGEN RNeasy Mini kit (Hilden, Germany).
|
| Label |
biotin
|
| Label protocol |
amplified and labeled according to the Affymetrix (Santa Clara, CA) GeneChip Whole Transcript Sense Target Labeling protocol
|
| |
|
| Hybridization protocol |
The resultant labeled cDNA was hybridized to Affymetrix Human Gene 1.0 ST arrays.
|
| Scan protocol |
GeneChips were scanned using the Affymetrix GeneArray Scanner GCS3000 7G plus.
|
| Data processing |
The data were analyzed with Bioconductor in R statistical software.
|
| |
|
| Submission date |
Jun 17, 2011 |
| Last update date |
Jan 08, 2019 |
| Contact name |
Woong Yang Park |
| E-mail(s) |
wypark@snu.ac.kr
|
| Phone |
+82-02-740-8241
|
| Fax |
+82-02-744-4534
|
| Organization name |
Seoul National University
|
| Department |
Biochemistry and Molecular Biology
|
| Lab |
Molecular and Genomic Medicine
|
| Street address |
28 Yongondong, Chongnogu
|
| City |
Seoul |
| ZIP/Postal code |
110-799 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL6244 |
| Series (1) |
| GSE30074 |
Expression data from 30 medulloblastomas |
|
| Relations |
| Reanalyzed by |
GSE124814 |
