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Sample GSM75720 Query DataSets for GSM75720
Status Public on Sep 26, 2005
Title oocyte from secondary follicle stage rep4
Sample type RNA
 
Source name oocyte
Organism Mus musculus
Characteristics in vivo,secondary follicle stage, oocyte
Extracted molecule total RNA
Extraction protocol 60 oocytes were collected from ovary of 12 day old SJLB6 female mouse.Total RNA was extracted and purified using an Picopure kit (Arcturus).
Label biotin
Label protocol total RNA from 60 oocytes was processed to produce biotinylated cRNA targets using Affy Small Sample Target Labeling Assay Version II.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description oocyte from secondary follicle stage in vivo
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Sep 22, 2005
Last update date Sep 22, 2005
Contact name Hua Pan
E-mail(s) huapan@sas.upenn.edu
Organization name University of Pennsylvania
Department Department of Biology
Street address 415 S University Avenue
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL339
Series (1)
GSE3351 Gene expression during oocyte development

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
1415670_at 423.1 P
1415671_at 948.65 P
1415672_at 2579 P
1415673_at 115.4 P
1415674_a_at 497.1 P
1415675_at 403.95 P
1415676_a_at 2324.65 P
1415677_at 313.4 P
1415678_at 865.5 P
1415679_at 7665.55 P
1415680_at 836.65 P
1415681_at 294.09998 P
1415682_at 372.8 P
1415683_at 2392.45 P
1415684_at 1059.15 P
1415685_at 149.65 P
1415686_at 436.49997 P
1415687_a_at 552.15 P
1415688_at 6522.85 P
1415689_s_at 116.55 A

Total number of rows: 22690

Table truncated, full table size 412 Kbytes.




Supplementary data files not provided

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