|
Status |
Public on Mar 19, 2012 |
Title |
BF6 |
Sample type |
RNA |
|
|
Source name |
stool RNA breast fed
|
Organism |
Homo sapiens |
Characteristics |
gender: Male age: 3 months
|
Extracted molecule |
polyA RNA |
Extraction protocol |
PolyA RNA was extracted from stool samples following the protocol published in Biomarkers, 2003, Jan-Feb;8(1):51-61.
|
Label |
biotin
|
Label protocol |
Ambion MessageAmp II aRNA Amplification and Biotin Enhanced kits: Manual Labelled cRNA Target preparation following manufacturer's instructions http://www.ambion.com/techlib/prot/fm_1751.pdf and http://www.ambion.com/techlib/prot/fm_1791.pdf
|
|
|
Hybridization protocol |
Codelink Gene Expression System: Single-Assay Bioarray Hybridization and Detection according to manufacturer's instructions http://www.appliedmicroarrays.com/pdf/codelink_bioarray_processing_protocol.pdf
|
Scan protocol |
Codelink Gene Expression System: Single-Assay Bioarray Hybridization and Detection according to manufacturer's instructions http://www.appliedmicroarrays.com/application_notes/63005079.pdf
|
Description |
Raw data file: T00346134_BF6_1.TXT
|
Data processing |
Median normalized values derived from Codelink Expression Analysis Version 5.0
|
|
|
Submission date |
Jul 31, 2011 |
Last update date |
Mar 22, 2012 |
Contact name |
Jennifer Goldsby |
E-mail(s) |
jsgoldsby@tamu.edu
|
Phone |
979-845-3908
|
Organization name |
Texas A&M University
|
Department |
Nutrition and Food Sciences
|
Street address |
112 Cater-Mattil
|
City |
College Station |
State/province |
TX |
ZIP/Postal code |
77845 |
Country |
USA |
|
|
Platform ID |
GPL2895 |
Series (1) |
GSE31075 |
Mutualism between gut microbiota and the host as revealed in a comparative study of breast-fed versus formula-fed infants |
|