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Sample GSM835240 Query DataSets for GSM835240
Status Public on Oct 29, 2012
Title PI70
Sample type RNA
 
Source name gingival tissue, healthy individual
Organism Homo sapiens
Characteristics cell type: primary tissue, biopsy
Extracted molecule total RNA
Extraction protocol RNA extracted using RNeasy (Qiagen) according to the manufacturers guidelines
Label biotin
Label protocol according to the manufacturers guidelines (Affymetrix)
 
Hybridization protocol according to the manufacturers guidelines (Affymetrix)
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description gene expression from biopsies
Data processing Sample data was processed using GCOS 1.3.0 (Affymetrix default settings) and normalized using RMA
 
Submission date Nov 17, 2011
Last update date Oct 30, 2012
Contact name Robert Haesler
E-mail(s) r.haesler@mucosa.de
Phone +49 (0) 431 597 5754
Organization name University Clinic of Schleswig Holstein
Department IKMB / 1st Dept. of Medicine
Lab Functional Genomics Platform
Street address Schittenhelmstr. 12
City Kiel
ZIP/Postal code 24105
Country Germany
 
Platform ID GPL6244
Series (1)
GSE33774 Expression data from gingival tissue

Data table header descriptions
ID_REF
VALUE RMA normalized data, (linear, NOT log2 transformed)

Data table
ID_REF VALUE
7892501 15.20962839
7892502 11.22908134
7892503 5.886507793
7892504 236.2017756
7892505 9.959118139
7892506 17.77171493
7892507 24.05795318
7892508 44.15937964
7892509 1032.925151
7892510 10.85537004
7892511 8.400312508
7892512 88.22483979
7892513 4.593293592
7892514 1161.312076
7892515 499.3494597
7892516 21.96739663
7892517 45.55334214
7892518 6.066599198
7892519 35.22617684
7892520 347.7626056

Total number of rows: 33297

Table truncated, full table size 646 Kbytes.




Supplementary file Size Download File type/resource
GSM835240.CEL.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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