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Sample GSM98811 Query DataSets for GSM98811
Status Public on Apr 03, 2006
Title MGU74Av2_day1_GFP_rep2
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day1 after transduction with GFP.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL81
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
100001_at 5.4996443 A
100002_at 9.679374 A
100003_at 689.43536 P
100004_at 56.42635 A
100005_at 361.4366 P
100006_at 47.62692 P
100007_at 219.87578 P
100009_r_at 15.508997 A
100010_at 170.48897 P
100011_at 280.48187 P
100012_at 30.028057 A
100013_at 25.408358 A
100014_at 52.466606 P
100015_at 73.36525 A
100016_at 272.45236 P
100017_at 2332.9492 P
100018_at 65.77574 A
100019_at 338.8881 P
100020_at 401.03406 P
100021_at 1513.722 P

Total number of rows: 12488

Table truncated, full table size 264 Kbytes.




Supplementary file Size Download File type/resource
GSM98811.CEL.gz 2.9 Mb (ftp)(http) CEL

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