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Sample GSM98849 Query DataSets for GSM98849
Status Public on Apr 03, 2006
Title MGU74Cv2_day0_none_rep1
Sample type RNA
 
Source name myoblast (C2C12 cells) differentiated into myotubes
Organism Mus musculus
Characteristics Cell line: C2C12
Growth protocol C2C12 cells were cultured in DMEM containing 10% calf serum. They were then cultured in DMEM containing 2% heat-inactivated bovine calf serum for 3 days to induce differentiation into myotubes.
Extracted molecule total RNA
Label biotin
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Gene expression data from cells on day 0, before transduction with either PGC-1a or GFP.
Data processing The timecourse data from this platform were sample normalized via linear fit to the median scan, using Present genes.
 
Submission date Mar 03, 2006
Last update date Apr 03, 2006
Contact name Vamsi K. Mootha
Organization name Broad Institute
Department Medical and Population Genetics
Lab Mootha
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL83
Series (1)
GSE4330 Mitochondrial biogenesis induced by PGC-1alpha

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)

Data table
ID_REF VALUE ABS_CALL
128520_at 354.7 P
128523_at 10.3 A
128529_at 7.4 A
128550_at 9.7 A
128554_at 23.4 A
128577_s_at 6 A
128578_r_at 51 A
128579_r_at 76 A
128580_at 5.6 A
128582_at 4.4 A
128583_at 2.1 A
128590_at 36.2 A
128624_at 2.2 A
128643_r_at 24.7 A
128644_at 67.7 M
128645_at 12.8 A
128646_at 3.8 A
128647_at 4 A
128651_at 12.3 A
128652_at 7.4 A

Total number of rows: 11934

Table truncated, full table size 200 Kbytes.




Supplementary file Size Download File type/resource
GSM98849.CEL.gz 2.8 Mb (ftp)(http) CEL

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