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Sample GSM9888 Query DataSets for GSM9888
Status Public on Oct 02, 2003
Title mouse_testis_day_08_replicate_2_GPL83
Sample type RNA
 
Source name 8 day old testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Full testis RNA preparation was performed using RNA Stat-60 (Teltest, Friendswood, TX), according to the manufacturer’s protocol. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 8.788).
Keywords = Mus musculus, testis, spermatogenesis
 
Submission date Sep 09, 2003
Last update date Oct 28, 2005
Contact name Nikolaus Schultz
E-mail(s) schultz@cbio.mskcc.org
Phone 646-888-2604
Organization name Memorial Sloan-Kettering Cancer Center
Department Computational Biology Center
Street address 1275 York Ave, Box 460
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL83
Series (1)
GSE640 Spermatogenesis

Data table header descriptions
ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 55.7 A 0.772364
AFFX-MurIL10_at 54.9 A 0.60308
AFFX-MurIL4_at 27 A 0.749204
AFFX-MurFAS_at 90.2 A 0.195266
AFFX-BioB-5_at 1748.7 P 0.000297
AFFX-BioB-M_at 3663.5 P 0.000044
AFFX-BioB-3_at 2481.5 P 0.000044
AFFX-BioC-5_at 5346.9 P 0.00007
AFFX-BioC-3_at 4409 P 0.000044
AFFX-BioDn-5_at 6516 P 0.000044
AFFX-BioDn-3_at 25777.4 P 0.000052
AFFX-CreX-5_at 63972 P 0.000044
AFFX-CreX-3_at 65251.8 P 0.000044
AFFX-BioB-5_st 210.6 A 0.102165
AFFX-BioB-M_st 369.1 A 0.250796
AFFX-BioB-3_st 354.5 A 0.250796
AFFX-BioC-5_st 111 A 0.559354
AFFX-BioC-3_st 26.4 A 0.559354
AFFX-BioDn-5_st 666.8 P 0.036569
AFFX-BioDn-3_st 595.2 M 0.054213

Total number of rows: 11934

Table truncated, full table size 312 Kbytes.




Supplementary file Size Download File type/resource
GSM9888.cel.gz 2.6 Mb (ftp)(http) CEL

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