|
| Status |
Public on Oct 15, 2012 |
| Title |
02_9575 |
| Sample type |
RNA |
| |
|
| Source name |
periperal blood
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Male
age (month): 25
ethnicity: White
fever: Yes
pathogen: HHV6
group: HHV6
sentrix barcode: 7018879078
sample section: J
hybridization date: 2012-04-24
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated from peripheral blood using Tempus Blood RNA Tubes (Applied Biosystems, Carlsbad, California) according to the manufacturer’s instructions.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
replicate 1
|
| Data processing |
The image-derived data were processed with Illumina GenomeStudio (v.2011.1), log2 quantile normalized with Partek Genomics Suite (v.6.6, build 6.12.0420).
|
| |
|
| Submission date |
Aug 27, 2012 |
| Last update date |
Nov 30, 2020 |
| Contact name |
Jinsheng Yu |
| E-mail(s) |
jyu@wustl.edu
|
| Organization name |
Washington University School of Medicine
|
| Department |
Genetics
|
| Lab |
GTAC Lab
|
| Street address |
660 S. Euclid Ave.
|
| City |
St. Louis |
| State/province |
MO |
| ZIP/Postal code |
63110 |
| Country |
USA |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE40396 |
Whole blood transcriptional signature distinguishes viral infection from bacterial infection in febrile young children. |
|
| Relations |
| Reanalyzed by |
GSE162330 |
