LOC4339860 protein arginine N-methyltransferase 7-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4339860
Gene description: protein arginine N-methyltransferase 7-like
Locus tag: OSNPB_060105500
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: PRMT7; OsJ_19828; OsJ_019028
Expression: Ubiquitous expression in flower buds (RPKM 6.8), leaves before flowering (RPKM 6.6) and 6 other tissues See more
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Genomic context

Location:: chromosome: 6

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	6	NC_089040.1 (531678..538672)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	6	NC_029261.1 (375689..382771)

Chromosome 6 - NC_089040.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein-arginine N-methyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in peptidyl-arginine methylation	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: protein arginine N-methyltransferase 7

Names: LOC_Os06g01640; P0644B06.25; putative protein arginine N-methyltransferase 7

NP_001407908.1

EC 2.1.1.-

XP_015641006.1

EC 2.1.1.-

XP_015641007.1

EC 2.1.1.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001420979.1 → NP_001407908.1 protein arginine N-methyltransferase 7

Status: VALIDATED

Source sequence(s)

AK099594, AP014962, CI461984

UniProtKB/Swiss-Prot

A0A0P0WRB2, A3B7K6, B9FR35, Q5VS72

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

NC_089040.1 Reference ASM3414082v1 Primary Assembly

Range

531678..538672

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015785520.3 → XP_015641006.1 protein arginine N-methyltransferase 7 isoform X1

UniProtKB/Swiss-Prot

A2Y8B9, B8B1M3

Conserved Domains (1) summary

cl17173
Location:63 → 225

AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
XM_015785521.3 → XP_015641007.1 protein arginine N-methyltransferase 7 isoform X2

UniProtKB/Swiss-Prot

A2Y8B9, B8B1M3

Conserved Domains (1) summary

cl17173
Location:63 → 225

AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...